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Facial Skin Microbiome in Patients With Moderate-to-Severe Acne Vulgaris Treated With Isotretinoin

Clinical Characteristics and Longitudinal Changes in the Facial Skin Microbiome of Patients With Moderate-to-Severe Acne Vulgaris Treated With Isotretinoin: A Prospective Cohort Study

Status
Recruiting
Phases
Unknown
Study type
Observational
Source
ClinicalTrials.gov
Registry ID
NCT07834138
Acronym
FACEMICRO
Enrollment
90
Registered
2026-09-22
Start date
2026-01-13
Completion date
2027-03-07
Last updated
2026-10-01

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Acne Vulgaris

Keywords

Skin microbiome, Facial microbiome, Isotretinoin, 16S rRNA sequencing, Cutibacterium acnes, Bacterial diversity, Microbial dysbiosis

Brief summary

Acne vulgaris is associated with changes in the facial skin microbiome, but longitudinal microbiome changes during isotretinoin therapy remain incompletely understood. This prospective observational cohort study aims to characterize the facial skin microbiome in patients with moderate-to-severe acne vulgaris before and during isotretinoin treatment and to compare microbiome profiles with healthy individuals. Participants with moderate-to-severe acne vulgaris receiving standard-of-care oral isotretinoin will be followed prospectively. Facial skin swab samples will be collected before treatment and at scheduled follow-up visits during therapy. Healthy volunteers without acne will provide a single facial skin swab for comparison. Bacterial communities will be analyzed using 16S rRNA gene sequencing, and clinical severity will be assessed using validated acne severity scores and lesion counts. The study will evaluate changes in microbial diversity, bacterial composition, and the relative abundance of acne-associated microorganisms during isotretinoin treatment. Associations between microbiome changes and clinical improvement will also be explored. Results are expected to improve understanding of the role of the skin microbiome in acne and provide evidence for future microbiome-based therapeutic strategies.

Detailed description

Acne vulgaris is a chronic inflammatory disease of the pilosebaceous unit and is one of the most common dermatologic disorders worldwide. Increasing evidence suggests that acne is associated with alterations in the composition and diversity of the skin microbiome rather than the presence of a single pathogenic microorganism. However, longitudinal changes in the facial skin microbiome during isotretinoin treatment have not been fully characterized in Southeast Asian populations. This study is a prospective observational cohort conducted in Vietnam. The study includes two participant groups: patients with moderate-to-severe acne vulgaris and healthy volunteers without acne. Patients receive oral isotretinoin according to routine clinical practice and institutional treatment protocols. The study does not assign or modify treatment; investigators prospectively observe clinical and microbiome changes during routine care. Facial skin samples are collected using standardized skin swab procedures from predefined facial sites. Samples are processed for bacterial DNA extraction and 16S rRNA gene sequencing to characterize microbial communities. Sequencing data are analyzed using bioinformatics pipelines for taxonomic classification and diversity analysis. Clinical assessments include validated acne severity grading systems, inflammatory and non-inflammatory lesion counts, and evaluation of treatment response during follow-up. Healthy volunteers provide baseline microbiome samples for comparison with acne participants before treatment. The primary objective is to characterize longitudinal changes in the facial skin microbiome during isotretinoin treatment in patients with moderate-to-severe acne vulgaris. Secondary objectives include comparing baseline microbiome characteristics between acne patients and healthy individuals and exploring associations between microbiome composition and clinical treatment outcomes. Study findings may contribute to a better understanding of microbiome dynamics during isotretinoin therapy and provide a foundation for future microbiome-targeted approaches in acne management.

Interventions

Oral isotretinoin administered as part of routine clinical care according to institutional treatment protocols. The study does not assign or modify isotretinoin treatment; investigators prospectively

Sponsors

Can Tho University of Medicine and Pharmacy
Lead SponsorOTHER

Study design

Observational model
COHORT
Time perspective
PROSPECTIVE

Eligibility

Sex/Gender
ALL
Age
16 Years to 35 Years
Healthy volunteers
Yes

Inclusion criteria

Acne Vulgaris Cohort: * Participants aged 16-35 years. * Clinical diagnosis of acne vulgaris. * Presence of acne lesions on both cheeks. * Indication for oral isotretinoin treatment according to clinical assessment at Can Tho University of Medicine and Pharmacy Hospital. * Willingness to participate in the study. Healthy Control Cohort: * Voluntary participation in the study. * No history or clinical manifestations of acne vulgaris. * No use of antibiotics or isotretinoin within the previous 6 months. * No lesions of other skin diseases on the face.

Exclusion criteria

* Current dermatologic diseases such as rosacea, contact dermatitis, eczema, or psoriasis. * Current acute or chronic medical diseases. * Use of antibiotics or isotretinoin within the previous 3 months. * Use of phototherapy or topical probiotics on the facial skin within the previous 3 months. * Use of facial cleansing products or topical medications within 24 hours before sample collection. * History of allergy. * Unwillingness to participate in the study.

Design outcomes

Primary

MeasureTime frameDescription
Shannon-Wiener Diversity Index of the Facial Skin Microbiome at BaselineAt baseline, before isotretinoin treatment in the acne cohortDifference in the Shannon-Wiener diversity index of the facial skin microbiome between participants with moderate-to-severe acne vulgaris and healthy controls at baseline.
Change in Shannon-Wiener Diversity Index of the Facial Skin Microbiome During Isotretinoin TreatmentBaseline to Week 20Change in the Shannon-Wiener diversity index of the facial skin microbiome from baseline to after 20 weeks of isotretinoin treatment in participants with moderate-to-severe acne vulgaris.

Secondary

MeasureTime frameDescription
Relative Abundance and Taxonomic Composition of the Facial Skin MicrobiomeBaselineComparison of bacterial community composition at the phylum and genus levels between the acne vulgaris and healthy control cohorts at baseline.
Change in Simpson Diversity Index During Isotretinoin TreatmenBaseline to Week 20Change in the Simpson diversity index of the facial skin microbiome from baseline to Week 20 in participants receiving oral isotretinoin.
Chao1 Richness Index of the Facial Skin Microbiome at BaselineBaselineComparison of the Chao1 richness index of the facial skin microbiome between the acne vulgaris and healthy control cohorts at baseline.
ACE Richness Index of the Facial Skin Microbiome at BaselineBaselineComparison of the ACE richness index of the facial skin microbiome between the acne vulgaris and healthy control cohorts at baseline.
Jaccard Distance of the Facial Skin Microbiome at BaselinebaselineComparison of Jaccard distance of the facial skin microbiome between the acne vulgaris and healthy control cohorts at baseline.
Bray-Curtis Dissimilarity of the Facial Skin Microbiome at BaselineBaselineComparison of Bray-Curtis dissimilarity of the facial skin microbiome between the acne vulgaris and healthy control cohorts at baseline.
Unweighted UniFrac Distance of the Facial Skin Microbiome at BaselineBaselineComparison of unweighted UniFrac distance of the facial skin microbiome between the acne vulgaris and healthy control cohorts at baseline.
Weighted UniFrac Distance of the Facial Skin Microbiome at BaselineBaselineComparison of weighted UniFrac distance of the facial skin microbiome between the acne vulgaris and healthy control cohorts at baseline.
Change in Relative Abundance of Bacterial Taxa at the Phylum Level From Baseline to Week 20Baseline to Week 20Change in the relative abundance of bacterial taxa at the phylum level in facial skin microbiome samples from baseline to Week 20 in participants receiving oral isotretinoin.
Change in Relative Abundance of Bacterial Taxa at the Genus Level From Baseline to Week 20Baseline to Week 20Change in the relative abundance of bacterial taxa at the genus level in facial skin microbiome samples from baseline to Week 20 in participants receiving oral isotretinoin.
Change in the Number of Amplicon Sequence Variants Detected From Baseline to Week 20Baseline to Week 20Change in the number of amplicon sequence variants detected in facial skin microbiome samples from baseline to Week 20 in participants receiving oral isotretinoin.
Change in Simpson Diversity Index From Baseline to Week 20Baseline to Week 20Change in the Simpson diversity index of the facial skin microbiome from baseline to Week 20 in participants receiving oral isotretinoin.
Change in Chao1 Richness Index From Baseline to Week 20Baseline to Week 20Change in the Chao1 richness index of the facial skin microbiome from baseline to Week 20 in participants receiving oral isotretinoin.
Change in ACE Richness Index From Baseline to Week 20Baseline to Week 20Change in the ACE richness index of the facial skin microbiome from baseline to Week 20 in participants receiving oral isotretinoin.
Change in Jaccard Distance From Baseline to Week 20Baseline to Week 20Change in Jaccard distance of the facial skin microbiome from baseline to Week 20 in participants receiving oral isotretinoin.
Change in Bray-Curtis Dissimilarity From Baseline to Week 20Baseline to Week 20Change in Bray-Curtis dissimilarity of the facial skin microbiome from baseline to Week 20 in participants receiving oral isotretinoin.
Change in Unweighted UniFrac Distance From Baseline to Week 20Baseline to Week 20Change in unweighted UniFrac distance of the facial skin microbiome from baseline to Week 20 in participants receiving oral isotretinoin.
Change in Weighted UniFrac Distance From Baseline to Week 20Baseline to Week 20Change in weighted UniFrac distance of the facial skin microbiome from baseline to Week 20 in participants receiving oral isotretinoin.
Clinical Response Rate to Isotretinoin at Week 20Week 20Proportion of participants classified as having good, fair, moderate, or poor/no clinical improvement after 20 weeks of oral isotretinoin treatment. Good, fair, moderate, and poor/no improvement are defined according to the predefined clinical response criteria in the study protocol.

Countries

Vietnam

Contacts

CONTACTTram Thi Bao Pham
ptbtram@ctump.edu.vn84 0366 100 241

Outcome results

None listed

Source: ClinicalTrials.gov · Data processed: Oct 2, 2026