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Base-Edited Hematopoietic Stem/Progenitor Cell Gene Therapy for Treatment of CXCR4-WHIM

Phase 1/2 Base-Edited Hematopoietic Stem/Progenitor Cell Gene Therapy for Treatment of CXCR4-WHIM

Status
Not yet recruiting
Phases
Phase 1Phase 2
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT07775313
Enrollment
10
Registered
2026-08-20
Start date
2026-09-16
Completion date
2033-12-31
Last updated
2026-09-11

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

WHIM, Warts, Hypogammaglobulinemia, Immunodeficiency, Myelokathexis

Keywords

Gene Editing, base editing

Brief summary

Background: Warts, hypogammaglobulinemia, infections and myelokathexis syndrome (WHIMs) is a rare disorder that affects the immune system. People with WHIMs can have severe infections all over their body. WHIMs is caused by a mutation in the CXCR4 gene. Treatment with drugs can help control the infections but does not cure the disorder. Researchers want to try a treatment where they collect stem cells from a person with WHIMS, use base-editing to replace the bad gene with a healthy version, and return the new cells to the person. This could cure WHIMs. Objective: To test a treatment using base-edited stem cells in people with WHIMs. Eligibility: People aged 3 years and older with WHIMs. Design: The study has 4 stages. Stage 1: Screening. Participants will be screened at 1 or more visits. They will have a physical exam with blood tests. A sample of tissue and fluid (biopsy) will be taken from the bone marrow in the hip. Stage 2: Apheresis. Blood will be taken from the body through a needle; the blood will pass through a machine that separates out the stem cells. The remaining blood will be returned to the body through a different needle. The collected stem cells will undergo gene editing. Stage 3: Treatment. Participants will stay in the hospital for about 4 weeks. They will receive 3 drugs to prepare their body for the procedure. Then the edited stem cells will be returned to their bloodstream. They will stay in the hospital until they recover. Stage 4: Follow-up. Participants will have 8 follow-up visits over 5 years. Long-term visits will continue for 15 years.

Detailed description

Study Description: This is a phase 1/2, non-randomized study of a single infusion of autologous hematopoietic stem/progenitor cells (HSPC) base-edited to repair CXCR4 mutations in 10 participants with (Warts, Hypogammaglobulinemia, Infections, and Myelokathexis) WHIM syndrome. Primary Objective: Evaluate safety of treatment with BE-HSPC CXCR4 in participants with WHIM syndrome. Secondary Objectives: Evaluate: * Efficacy. * Genetic correction. * Immune reconstitution. * Clinical efficacy. Exploratory Objective: Evaluate off-target (OT) editing activity. Primary Endpoint: Safety assessed by: * Incidence of adverse events (AEs) for each participant. * Evaluate overall incidence of AEs for the study. * Incidence of serious adverse events (SAEs). Secondary Endpoints (24 months post-study agent infusion): * Efficacy: \>= 5% gene edited circulating myeloid cells by 12 months after BE HSPC infusion. * Gene correction: --Frequency of corrected alleles in peripheral blood cells (such as myeloid, T, B, and natural killer \[NK\] cells). --\>200/microL edited neutrophils by 12 months post receipt of the BE HSPC infusion. * Immune reconstitution: * T, B, and NK cell number improvement from baseline. * B-cell function: immunoglobulin (Ig) production. * Clinical efficacy: Improvement from baseline problems such as recurrent infection, wart burden, gastrointestinal complaints, or immune dysregulation. Exploratory Endpoint: Evaluate for frequency of OTs by high-throughput sequencing (HTS) of the target mutation at the genomic locus 2 years post-infusion.

Interventions

DRUGBusulfan

Myeloid conditioning agent, administered once daily x 2 days, targeting a total AUC of 9000 micromol\*min/L.

DRUGPalifermin

Mucositis prophylaxis agent, will be administered at 60 mcg/kg/day for 3 days before initiation of busulfan (days -6 to -4), as well as for the 3 days following study agent administration (days 1 to 3).

DRUGPlerixafor

Hematopoietic stem cell mobilizing agent necessary for the collection of the hematopoietic stem and progenitor cells (HSPCs) to create the study product.

DRUGFilgrastim

Hematopoietic stem cell mobilizing agent necessary for the collection of the hematopoietic stem and progenitor cells (HSPCs) to create the study product.

The study cell product is base edited autologous HSPCs which will be administered as a one-time infusion following myeloid conditioning.

Sponsors

National Institute of Allergy and Infectious Diseases (NIAID)
Lead SponsorNIH

Study design

Allocation
NA
Intervention model
SINGLE_GROUP
Primary purpose
TREATMENT
Masking
NONE

Eligibility

Sex/Gender
ALL
Age
3 Years to 75 Years
Healthy volunteers
No

Inclusion criteria

* INCLUSION CRITERIA: In order to be eligible to participate in this study, an individual must meet all of the following criteria: * Aged \>= 3 years and weighing \>=15 kg. * Confirmed CXCR c.1000C\>T, pR334X mutation. * Ability to undergo apheresis for stem cell collection. * Medical lab data (historical) of neutropenia, or B cell dysfunction (low or absent IgG levels, or on IV gamma globulin. * Expected survival of at least 120 days. * Must be willing to have blood and tissue samples stored. * Participants of reproductive potential must agree to consistently use effective contraception from start of busulfan conditioning through at least one-year post-treatment. Acceptable forms of contraception are: * Hormonal contraception in continuously effective use. * Male or female condom with spermicide as indicated. * Diaphragm or cervical cap in consistent and effective pattern of use with a spermicide. * Intrauterine device in-situ

Exclusion criteria

An individual who meets any of the following criteria will be excluded from participation in this study: * Acute onset infection as indicated by symptoms such as persistent fevers, or imaging (new pneumonia on CT for example), isolated pathogen and requiring medical intervention. * Severe liver dysfunction with transaminases \> 6 fold upper limit will be excluded until approval by hepatology consult who will provide mitigating plans for liver protection. * Renal dysfunction-serum creatinine \>3.0 x ULN. * Coagulation dysfunction- Prothrombin INR or Partial thromboplastin time \>2 x ULN (patients on controlled anticoagulation agents will not be excluded for therapeutic levels). * Known hypersensitivity to busulfan or any component of the product. * Contraindications for administration of busulfan, including but not limited to: hypersensitivity, chronic lymphocytic leukemia, acute leukemia in blastic crisis, pregnancy, or lactation. * Childhood malignancy (occurring before 18 years of age) in the participant or a first degree relative, or previously diagnosed known genotype of the participant conferring a predisposition to cancer unless approved by the with appropriate consultants and approved by the study PI (no DNA or other testing for cancer predisposition genes will be performed as part of the screen for this protocol). * Any other condition that, in the opinion of the investigator, may compromise the safety or compliance of the participant, or would preclude the participant from successful study completion.

Design outcomes

Primary

MeasureTime frameDescription
To evaluate the safety of base-edited autologous CD34+ cellsInitiated from the time of the infusion of base-edited cells through 2 years post-infusionSafety of gene therapy using base-edited autologous hematopoietic stem and progenitor cells as measured by study agent-related adverse events and serious adverse events

Secondary

MeasureTime frameDescription
Evaluate the efficacy of base-edited autologous CD34+ cellsAssessed 12 months post-infusion of base-edited cellsEfficacy of gene therapy as determined by percentage of participants who have \>= 5 percent gene edited circulating myeloid cells
Evaluate genetic correctionAssessed 12 months post-infusion of base edited cellsGenetic correction as determined by the presence of \>200/uL edited neutrophils
Evaluate immune reconstitutionAssessed 12 months post-infusion of base edited cellsImmune reconstitution as determined by: T, B, and NK cell number improvement from baseline; immunoglobulin production
Evaluate clinical efficacyAssessed 12 months post-infusion of base edited cellsClinical efficacy as determined by: improvement from baseline problems (i.e., recurrent infections, wart burden)

Countries

United States

Contacts

CONTACTSuk S De Ravin, M.D.
sderavin@mail.nih.gov(301) 496-6772
PRINCIPAL_INVESTIGATORSuk S De Ravin, M.D.

National Institute of Allergy and Infectious Diseases (NIAID)

Outcome results

None listed

Source: ClinicalTrials.gov · Data processed: Sep 12, 2026