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Stanford University Microbiome Bank

Stanford University Microbiome Bank

Status
Not yet recruiting
Phases
Unknown
Study type
Observational
Source
ClinicalTrials.gov
Registry ID
NCT07625059
Acronym
SUMB
Enrollment
50
Registered
2026-06-04
Start date
2026-08-01
Completion date
2027-08-01
Last updated
2026-06-04

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Healthy Adult Participants

Brief summary

This protocol establishes a centralized stool donor bank and research platform to support microbiota transplantation therapy (MTT) for microbiota-mediated diseases. The study will characterize donor microbiome, metabolite, immune, and dietary profiles.

Detailed description

Eligible participants will undergo comprehensive baseline screening including physical examination, infectious disease testing, and health history assessment. Those who qualify will enter an active donation period of up to 12 months, during which they will provide stool samples at a frequency ranging from once per month to once per week, depending on their availability. In addition to stool collection, participants will provide biospecimens including blood draws (for infectious disease and metabolic monitoring), saliva samples, and small intestinal fluid samples collected using an ingestible capsule device (CapScan). The CapScan capsule is swallowed by the participant, collects intestinal fluid as it passes through the small intestine, and is retrieved from stool and returned to the research team for analysis. This biobank will serve as infrastructure for ongoing microbiome research, providing rigorously screened and comprehensively characterized biospecimens to advance understanding of the gut microbiome's role in health and disease, and to support development of safe and effective microbiota-based therapies.

Interventions

OTHERMicrobiome bank

This is an observational study with no interventions.

Sponsors

Sean Spencer
Lead SponsorOTHER
Kepner Microbiome Fund
CollaboratorUNKNOWN
Mischa Deeter Research Fund
CollaboratorUNKNOWN
GI Diseases Fund
CollaboratorUNKNOWN

Study design

Observational model
COHORT
Time perspective
PROSPECTIVE

Eligibility

Sex/Gender
ALL
Age
18 Years to 80 Years
Healthy volunteers
Yes

Inclusion criteria

* Provision of signed and dated informed consent form * Stated willingness to comply with all study procedures and availability for the duration of the study * Any person aged 18-80 years of age, inclusive at the time of signing the consent * In good general health as evidenced by medical history * Ability to travel to donation facility on a weekly basis * Residence within 5 miles of Stanford Campus * For females of reproductive potential: use of highly effective contraception for at least 1 month prior to screening and agreement to use such a method during study participation * Capable of providing signed informed consent.

Exclusion criteria

* Inflammatory bowel disease * Enteric infections * Previous infection with Clostridium difficile * History of gastrointestinal surgery: Participants with gastrointestinal surgeries below the pylorus will be excluded from this protocol, including participants with a history of colectomy, segmental colonic resection, and small bowel resections. * Documented severe gastroparesis * Active intestinal obstruction * Dysphagia (oropharyngeal, esophageal, functional or neuromuscular) * History or current malignancy diagnosis * History of recurrent aspiration episodes * Any conditions associated with a high risk of bleeding, including but not limited to coagulopathy/bleeding disorder, severe liver disease, active or recent GI bleeding, or recent abdominal or other GI surgery * Active diagnosis of major depressive disorder * Active diagnosis of major anxiety disorder * Severe immunodeficiency, inherited or acquired (e.g., Human immunodeficiency virus, active chemotherapy or immunosuppressive medications \[including steroids, biologic therapy, or bone marrow suppressive agents\], or radiation therapy) * BMI of less than 18 or BMI greater than 30 * Record of eating disorders * Active use of GLP-1 inhibitors * Diagnosis of Human immunodeficiency virus infection; Hepatitis A, B, C \& E; Epstein Bar Virus; parasitic infections; Syphilis * Pregnancy \& lactation * Active drug, or alcohol use disorder * Tobacco, marijuana and e-cigarette use * Any other significant medical condition that could confound or interfere with evaluation of safety or tolerability or prevent compliance with the study protocol at the discretion of the Investigator Prior/concomitant therapy * Active antibiotic use * Active treatment with high levels of immunosuppressive therapies (active chemotherapy or immunosuppressive medications \[including steroids, biologic therapy, or bone marrow suppressive agent\], or radiation therapy) * Simultaneous participation in another interventional clinical trial Other

Design outcomes

Primary

MeasureTime frameDescription
Donor Eligibility RateDuring screening periodProportion of screened individuals who meet eligibility criteria for stool donation

Secondary

MeasureTime frameDescription
Microbiome Diversity of DonorsBaseline and every 60 days through study completion, up to 12 monthsAlpha diversity (e.g., Shannon index) of stool samples from eligible donors

Countries

United States

Contacts

CONTACTRoujheen Sabetan, MPH
rsabetan@stanford.edu650-498-8188
PRINCIPAL_INVESTIGATORSean Spencer, MD, PhD

Stanford University

Outcome results

None listed

Source: ClinicalTrials.gov · Data processed: Jun 5, 2026