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The Impact of Food on Gut Microbiome Composition - a Clinical Trial Determining the Influence of Diet in Gut Microbiome Colonisation and Host Health

Food Derived Bacteria and Their Role in Treating Disease

Status
Completed
Phases
Early Phase 1
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT05986955
Acronym
FIG
Enrollment
25
Registered
2023-08-14
Start date
2023-06-16
Completion date
2023-11-28
Last updated
2025-04-24

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Healthy

Brief summary

The goal of this clinical trial is to examine the impact of food derived bacteria on gut microbiome composition and host health. The main questions it aims to answer are: * what is the the rate of gastrointestinal colonisation of food derived bacteria? * what is the contribution of food derived bacteria to gut microbiome stability? Participants will complete a cross over feeding study of dietitian designed meals of known microbial load and will be asked to provide stool and blood samples for analysis.

Detailed description

To understand the role and stability of food derived bacteria in impacting microbiome composition, 20 healthy participants will be recruited for this single site double blinded randomised controlled crossover pilot trial. The study is divided into four 14 day diet phases - baseline habitual, specified diet 1, habitual washout and specified diet 2. Participants will be randomly assigned to receive a microbial or non-microbial diet in specified diet 1 phase. Each participant will then crossover to receive the alternative diet in the specified diet 2 phase. The microbial and non-microbial diets will be identical except for the removal of naturally occurring food derived bacteria in non-microbial diet. At the commencement of the study and at the end of each diet phase, participants will attend a research clinic to undergo comprehensive clinical and anthropometric assessment and dietary evaluation.

Interventions

OTHERDiet

Participants will be assigned prospectively to microbial or non-microbial diet for first phase of trial and will then cross over to the alternate diet following a washout period.

Sponsors

Monash University
Lead SponsorOTHER

Study design

Allocation
RANDOMIZED
Intervention model
CROSSOVER
Primary purpose
OTHER
Masking
QUADRUPLE (Subject, Caregiver, Investigator, Outcomes Assessor)

Eligibility

Sex/Gender
ALL
Age
18 Years to 65 Years
Healthy volunteers
Yes

Inclusion criteria

* Have no genetic conditions (e.g. Prader Willi or Down's Syndrome) * Not diagnosed with a significant medical conditions (e.g. irritable bowel syndrome, inflammatory bowel disease or type 1/2 diabetes) * Do not require drug-therapy (e.g. steroids or insulin or antibiotics) * Not taking dietary supplements, probiotics, prebiotics, symbiotics or fibre supplementation * Any condition that will affect participation in the study * Not pregnant, planning a pregnancy or breastfeeding * Able to complete a two-month dietary study and agree to eating all meals provided * Have no dietary allergies or dietary restrictions that prevent consumption of provided study meals * Open bowels regularly - mostly daily * Able to read, write and understand English

Exclusion criteria

* Dietary concerns identified by dietitian * Aged less than 18 years and older than 65 years * Diagnosed with a medical condition that requires drug therapy * Taking medications or supplements known to alter gastrointestinal microbiota * Women who are pregnant, planning a pregnancy or breastfeeding * Anyone with a diagnosed gastrointestinal condition/disease e.g. irritable bowel syndrome or inflammatory bowel disease * Known dietary allergy and/or intolerance, follows a vegan or vegetarian diet, or has coeliac disease * Anyone with a preference for specific food avoidance or exclusion of certain ingredients in habitual diet * Unable to tolerate blood collection procedures * Unable to provide regular stool samples throughout the study

Design outcomes

Primary

MeasureTime frameDescription
Characterisation of gut microbiomeDay 1, 4, 7, 11 and 14 of each phaseSequencing and bacterial culturing of stool samples

Secondary

MeasureTime frameDescription
Participant standing heightHeight will be measured on day 14 (at end of each diet phase (fortnightly))Measured by stadiometer
Participant weightWeight will be measured on day 14 (at end of each diet phase (fortnightly))Measured using balance scales
Participant waist circumferenceBaseline day 1 and end of each 14-day diet phaseMeasured using standard measuring tape
Participant Hip circumferenceBaseline day 1 and end of each 14-day diet phaseMeasured using standard measuring tape
Resting systolic and diastolic blood pressureBlood pressure will be measured on day 14 (at end of each diet phase (fortnightly))Measured using digital blood pressure monitor
Mental Health AssessmentCompleted at day 1 and end of study (day 56)Perceived Stress Scale survey completed by participants
Dietary complianceDay 1 to Day 14 of specified diet 1 and diet 2 phasesMeasured by participant completed daily diet checklist noting the amount of food they consumed of provided meals during specific diet 1 and 2 phases
Participant body mass index (BMI)BMI will be calculated on day 14 (at end of each diet phase (fortnightly))Assessed independently using height and weight measurements and appropriate formula
Changes in physical activity levelsCompleted at each of each 14-day diet phaseUsing International Physical Activity Questionnaire - Short Form (IPAQ-SF)
Glucose levelsBlood collected at baseline day 1 and day 14 of each phase (fortnightly)Blood samples collected will be assessed for glucose levels
Lipid studiesBlood collected at baseline day 1 and day 14 of each phase (fortnightly)Blood samples collected will be assessed for lipid studies
Irritable Bowel Syndrome-Severity Scoring System (IBS-SS)End of each 14-day diet phaseCompletion of Irritable Bowel Syndrome-Severity Scoring System (IBS-SS)
Gastrointestinal symptomatologyBaseline day 1 and day 14 of each diet phase (fortnightly)Completion of Gastrointestinal Symptom Rating Scale (GSRS)
Bowel movementBaseline day 1 and day 14 of each diet phase (fortnightly)Completion of Bristol Stool Chart questionnaires
End of study optional semi-structured interviewEnd of study (at least 8 weeks post-randomisation)Interview participants to assess challenges of adhering to study and compliance
Habitual dietary intakeDaily throughout 14-day baseline habitual and habitual washout phasesUsing research food diary mobile phone application

Countries

Australia

Outcome results

None listed

Source: ClinicalTrials.gov · Data processed: Feb 4, 2026