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Effect of Natural Food on Gut Microbiome and Phospholipid Spectrum of Immune Cells in COVID-19 Patients

Effect of Natural Food on Gut Microbiome and Phospholipid Spectrum of Immune Cells in COVID-19 Patients

Status
Completed
Phases
NA
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT05970861
Enrollment
75
Registered
2023-08-01
Start date
2023-09-01
Completion date
2024-08-30
Last updated
2025-02-05

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

COVID-19

Keywords

COVID-19, gut microbiome, antiphospholipid antibodies, rehabilitation, food products

Brief summary

The efficacy of natural foods such as freeze-dried mare's milk (Saumal) in post-COVID syndrome therapy has not been studied. The literature review has shown that researchers have focused more on evidence-based medications and less on natural products. Some raw foods, such as freeze-dried mare's milk, contribute to forming complete immune complexes and have antioxidant, membrane stabilizing, and antiviral effects. The use of Saumal proved its effectiveness in patients suffering from chronic hepatitis C. After 4 weeks of using freeze-dried mare's milk, the biodiversity of the intestinal microbiome was increased. The content of bacteria secreting short-chain fatty acids also increased. The study aims to confirm these effects at the gene level in patients who underwent COVID-19. This study will allow us to develop a highly evidence-based component of rehabilitation therapy in patients after COVID-19.

Detailed description

The study consists of three stages. Stage I. Randomized division of 75 patients under study into a main group of 38 patients receiving Saumal for 4 weeks and a control group of 37 patients not receiving Saumal. All respondents have suffered from COVID-19 in the last 6 months. At the moment of the research, all patients will be staying in rehabilitation centers in Almaty City. The study's biological material will be collected from the respondents (gut microbiome, antiphospholipid antibodies, biochemical blood analysis (glucose, ALT, AST, uric acid, TAGs, alkaline phosphatase)). Stage II. The main group will be given Saumal for four weeks, after which the gut microbiome, antiphospholipid antibodies, and biochemical blood analysis will be collected from both groups again. This will allow us to assess the impact of freeze-dried mare's milk on the condition of the gut microbiome, antiphospholipid antibodies, and biochemical blood analysis. Stage III. Data analysis. 1. Based on the results of gut microbiome sequencing, ELISA (antiphospholipid antibodies), and biochemical blood analysis in the main and control groups, we determine the dynamic changes of those parameters during COVID-19 rehabilitation. 2. According to the results, the effectiveness of Saumal itself regarding these 2 parameters will be evaluated. 3. Develop recommendations and an algorithm for patient management after COVID-19 to prevent complications.

Interventions

DIETARY_SUPPLEMENTFreeze-dried Mare Milk (Saumal)

Freeze-dried Mare Milk (Saumal) is frequently reported for having therapeutic and dietary properties associated with specific chemical composition and certain physical properties of the product. It contains a total of about 40 biologically active components, the most important of them vitamins A, C, B1, B2, B6, and B12, amino acids, enzymes, and trace elements (low molecular weight peptides, lactalbumins, and globulins). Saumal will be administered to patients at a dose of 25 grams of dry powder per 200 ml of water, 2 times a day, 30 minutes before the meal, for 4 weeks.

Sponsors

Asfendiyarov Kazakh National Medical University
Lead SponsorOTHER

Study design

Allocation
RANDOMIZED
Intervention model
PARALLEL
Primary purpose
TREATMENT
Masking
NONE

Eligibility

Sex/Gender
ALL
Age
18 Years to 75 Years
Healthy volunteers
No

Inclusion criteria

1. Age 18 years and older; 2. Patients in rehabilitation after COVID-19; 3. Signed informed consent; 4. Presence of patient's history of COVID-19, reliably established by PCR+ /presence of IgG/ diagnosis of coronavirus pneumonia on Computer Tomography based on discharge from hospital or outpatient records.

Exclusion criteria

1. Chronic inflammatory bowel disease; 2. Gut microbiota transplantation; 3. Chronic pancreatic disease, period of exacerbation; 4. Liver cirrhosis, Metavir stage 3-4; 5. Any disease in the decompensation stage; 6. Neuralgic and psychological disorders that interfere with the study; 7. Cancer; 8. Non-transportable patients; 9. Patients who do not reside in Almaty; 10. Patients who have refused to participate in the study.

Design outcomes

Primary

MeasureTime frameDescription
Gut Microbiome4 weeksIntestinal microbiome studies will be performed using the Illumina MiSeq Metagenomics Kit. Creation of libraries for NGS sequencing. The commercial Illumina MiSeq The Metagenomics Kit includes two primer pools that can amplify the hypervariable regions of 16S rRNA in bacteria. The first pool produces V2-4-8, while the second pool allows for the production of V3-6 and 7-9 regions of 16S rRNA. Sequencing will be performed on an Ion S5 analyzer using an Illumina MiSeq Chip Kit. Once the PCR products have been run, it is important to follow standard procedures for fragment end recovery, adaptor ligation, nick gap repair, qualitative and quantitative assessment of non-amplified libraries, and pooling.
Antiphospholipid Antibodies4 weeksIgG or IgM autoantibodies to cardiolipin, phosphatidyl serine, phosphatidyl-inositol, phosphatidyl acid, and β2-glycoprotein I are determined in human venous blood serum by enzyme immunoassay (ELISA) using the Anti-Phospholipid Screen IgG/IgM kit.
Biochemical Blood Analysis (Uric Acid)4 weeksThis biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)
Quality of Life Changes4 weeksConstructs: Physical Functioning (PF), Role Limitations due to Physical Health (RP), Bodily Pain (BP), General Health (GH), Vitality (VT), Social Functioning (SF), Role Limitations due to Emotional Problems (RE), Mental Health (MH). All scale ranges (for any construct): 0 to 100. Higher scores indicate: PF - better physical functioning; RP - fewer role limitations due to physical health; BP - less bodily pain; GH - better perceived general health; VT - greater vitality and less fatigue; SF - better social functioning; RE - fewer role limitations due to emotional problems; MH - better mental health. The SF-36 does not have a single total score but can be summarized using two summary measures: 1. Physical Component Summary (PCS). Combines the following scales: PF, RP, BP, GH. 2. Mental Component Summary (MCS). Combines the following scales: VT, SF, RE, MH. Higher scores indicate better physical and mental health. Range: Typically standardized (mean = 50, SD = 10)

Secondary

MeasureTime frameDescription
Biochemical Blood Analysis (ALT)4 weeksThis biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)
Biochemical Blood Analysis (Alkaline Phosphatase)4 weeksThis biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)
Biochemical Blood Analysis (AST)4 weeksThis biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)
Biochemical Blood Analysis (Glucose)4 weeksThis biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)
Biochemical Blood Analysis (Triacylglycerides)4 weeksThis biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)

Countries

Kazakhstan

Participant flow

Participants by arm

ArmCount
Main Group
Patients who had suffered from COVID-19 in the six months before the start of the study. Patients will receive Saumal (freeze-dried mare milk) for four weeks. Freeze-dried Mare Milk (Saumal): Freeze-dried Mare Milk (Saumal) is frequently reported for having therapeutic and dietary properties associated with specific chemical composition and certain physical properties of the product. It contains a total of about 40 biologically active components, the most important of them vitamins A, C, B1, B2, B6, and B12, amino acids, enzymes, and trace elements (low molecular weight peptides, lactalbumins, and globulins). Saumal will be administered to patients at a dose of 25 grams of dry powder per 200 ml of water, 2 times a day, 30 minutes before the meal, for 4 weeks.
30
Control Group
Patients who had suffered from COVID-19 in the six months before the start of the study. There will be no intervention.
30
Total60

Withdrawals & dropouts

PeriodReasonFG000FG001
Overall StudyLost to Follow-up43
Overall StudyPhysician Decision44

Baseline characteristics

CharacteristicMain GroupControl GroupTotal
Age, Categorical
<=18 years
0 Participants0 Participants0 Participants
Age, Categorical
>=65 years
10 Participants10 Participants20 Participants
Age, Categorical
Between 18 and 65 years
20 Participants20 Participants40 Participants
Count of Participants30 Participants30 Participants60 Participants
Race and Ethnicity Not Collected0 Participants
Sex: Female, Male
Female
20 Participants20 Participants40 Participants
Sex: Female, Male
Male
10 Participants10 Participants20 Participants

Adverse events

Event typeEG000
affected / at risk
EG001
affected / at risk
deaths
Total, all-cause mortality
0 / 00 / 0
other
Total, other adverse events
0 / 00 / 0
serious
Total, serious adverse events
0 / 00 / 0

Outcome results

Primary

Antiphospholipid Antibodies

IgG or IgM autoantibodies to cardiolipin, phosphatidyl serine, phosphatidyl-inositol, phosphatidyl acid, and β2-glycoprotein I are determined in human venous blood serum by enzyme immunoassay (ELISA) using the Anti-Phospholipid Screen IgG/IgM kit.

Time frame: 4 weeks

ArmMeasureGroupValue (MEAN)Dispersion
Main GroupAntiphospholipid AntibodiesIgM2.73 U/mlStandard Error 0.185
Main GroupAntiphospholipid AntibodiesIgG1.43 U/mlStandard Error 0.726
Control GroupAntiphospholipid AntibodiesIgM4.45 U/mlStandard Error 0.001
Control GroupAntiphospholipid AntibodiesIgG4.50 U/mlStandard Error 0.0001
Comparison: Null hypothesis: No statistically significant difference exists between antiphospholipid antibody levels before and after the mare's milk administration.~Alternate hypothesis: Statistically significant difference exists between antiphospholipid antibody levels before and after the mare's milk administration.p-value: >0.05Wilcoxon (Mann-Whitney)
Primary

Biochemical Blood Analysis (Uric Acid)

This biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)

Time frame: 4 weeks

ArmMeasureValue (MEAN)Dispersion
Main GroupBiochemical Blood Analysis (Uric Acid)5.56 mg/dLStandard Error 0.01
Control GroupBiochemical Blood Analysis (Uric Acid)7.87 mg/dLStandard Error 0.34
Comparison: Null hypothesis: No statistically significant difference exists between uric acid blood levels before and after the mare's milk administration.~Alternate hypothesis: Statistically significant difference exists between uric acid blood levels before and after the mare's milk administration.p-value: 0.01Wilcoxon (Mann-Whitney)
Primary

Gut Microbiome

Intestinal microbiome studies will be performed using the Illumina MiSeq Metagenomics Kit. Creation of libraries for NGS sequencing. The commercial Illumina MiSeq The Metagenomics Kit includes two primer pools that can amplify the hypervariable regions of 16S rRNA in bacteria. The first pool produces V2-4-8, while the second pool allows for the production of V3-6 and 7-9 regions of 16S rRNA. Sequencing will be performed on an Ion S5 analyzer using an Illumina MiSeq Chip Kit. Once the PCR products have been run, it is important to follow standard procedures for fragment end recovery, adaptor ligation, nick gap repair, qualitative and quantitative assessment of non-amplified libraries, and pooling.

Time frame: 4 weeks

ArmMeasureGroupValue (MEAN)Dispersion
Main GroupGut MicrobiomePercentage of Firmicutes phylum at 4 weeks51.87 Mean percentages of gut microbiota unitsStandard Error 0.001
Main GroupGut MicrobiomePercentage of Bacteroides phylum at 4 weeks29.43 Mean percentages of gut microbiota unitsStandard Error 0.178
Main GroupGut MicrobiomePercentage of Proteobacteria phylum at 4 weeks6.52 Mean percentages of gut microbiota unitsStandard Error 0.00001
Main GroupGut MicrobiomePercentage of Actinobacteria phylum at 4 weeks4.9 Mean percentages of gut microbiota unitsStandard Error 0.951
Main GroupGut MicrobiomePercentage of Bacilli class at 4 weeks4.02 Mean percentages of gut microbiota unitsStandard Error 0.043
Main GroupGut MicrobiomePercentage of Deltaproteobacteria class at 4 weeks0.94 Mean percentages of gut microbiota unitsStandard Error 0.048
Main GroupGut MicrobiomePercentage of Erysipelotrichi class at 4 weeks1.58 Mean percentages of gut microbiota unitsStandard Error 0.012
Main GroupGut MicrobiomePercentage of Caldilinea genus at 4 weeks0.06 Mean percentages of gut microbiota unitsStandard Error 0.014
Main GroupGut MicrobiomePercentage of Clostridium genus at 4 weeks5.07 Mean percentages of gut microbiota unitsStandard Error 0.008
Main GroupGut MicrobiomePercentage of Desulfovibrio genus at 4 weeks0.19 Mean percentages of gut microbiota unitsStandard Error 0.039
Main GroupGut MicrobiomePercentage of Escherichia genus at 4 weeks0.75 Mean percentages of gut microbiota unitsStandard Error 0.042
Main GroupGut MicrobiomePercentage of Lachnospira genus at 4 weeks1.77 Mean percentages of gut microbiota unitsStandard Error 0.004
Main GroupGut MicrobiomePercentage of Prevotella genus at 4 weeks8.85 Mean percentages of gut microbiota unitsStandard Error 0.003
Main GroupGut MicrobiomePercentage of Tindallia genus at 4 weeks0.20 Mean percentages of gut microbiota unitsStandard Error 0.02
Main GroupGut MicrobiomePercentage of Anaerobranca zavarzinii species at 4 weeks0.62 Mean percentages of gut microbiota unitsStandard Error 0.006
Main GroupGut MicrobiomePercentage of Alkaliphilus crotonatoxidans species at 4 weeks1.40 Mean percentages of gut microbiota unitsStandard Error 0.00001
Main GroupGut MicrobiomePercentage of Bacteroides xylanisolvens species at 4 weeks1.30 Mean percentages of gut microbiota unitsStandard Error 0.00001
Main GroupGut MicrobiomePercentage of Bifidobacterium catenulatum species at 4 weeks0.96 Mean percentages of gut microbiota unitsStandard Error 0.024
Main GroupGut MicrobiomePercentage of Bifidobacterium indicum species at 4 weeks0.10 Mean percentages of gut microbiota unitsStandard Error 0.026
Main GroupGut MicrobiomePercentage of Roseburia faecis species at 4 weeks0.72 Mean percentages of gut microbiota unitsStandard Error 0.006
Control GroupGut MicrobiomePercentage of Bifidobacterium catenulatum species at 4 weeks1.68 Mean percentages of gut microbiota unitsStandard Error 0.434
Control GroupGut MicrobiomePercentage of Firmicutes phylum at 4 weeks46.1 Mean percentages of gut microbiota unitsStandard Error 0.899
Control GroupGut MicrobiomePercentage of Escherichia genus at 4 weeks1.2 Mean percentages of gut microbiota unitsStandard Error 0.71
Control GroupGut MicrobiomePercentage of Bacteroides phylum at 4 weeks29.77 Mean percentages of gut microbiota unitsStandard Error 0.754
Control GroupGut MicrobiomePercentage of Alkaliphilus crotonatoxidans species at 4 weeks0.93 Mean percentages of gut microbiota unitsStandard Error 0.028
Control GroupGut MicrobiomePercentage of Proteobacteria phylum at 4 weeks7.91 Mean percentages of gut microbiota unitsStandard Error 0.823
Control GroupGut MicrobiomePercentage of Lachnospira genus at 4 weeks1.76 Mean percentages of gut microbiota unitsStandard Error 0.049
Control GroupGut MicrobiomePercentage of Actinobacteria phylum at 4 weeks9.36 Mean percentages of gut microbiota unitsStandard Error 0.003
Control GroupGut MicrobiomePercentage of Roseburia faecis species at 4 weeks0.36 Mean percentages of gut microbiota unitsStandard Error 0.551
Control GroupGut MicrobiomePercentage of Bacilli class at 4 weeks4.46 Mean percentages of gut microbiota unitsStandard Error 0.068
Control GroupGut MicrobiomePercentage of Prevotella genus at 4 weeks11.24 Mean percentages of gut microbiota unitsStandard Error 0.698
Control GroupGut MicrobiomePercentage of Deltaproteobacteria class at 4 weeks0.92 Mean percentages of gut microbiota unitsStandard Error 0.918
Control GroupGut MicrobiomePercentage of Bacteroides xylanisolvens species at 4 weeks1.63 Mean percentages of gut microbiota unitsStandard Error 0.245
Control GroupGut MicrobiomePercentage of Erysipelotrichi class at 4 weeks1.46 Mean percentages of gut microbiota unitsStandard Error 0.889
Control GroupGut MicrobiomePercentage of Caldilinea genus at 4 weeks0.17 Mean percentages of gut microbiota unitsStandard Error 0.345
Control GroupGut MicrobiomePercentage of Tindallia genus at 4 weeks0.00 Mean percentages of gut microbiota unitsStandard Error 1
Control GroupGut MicrobiomePercentage of Bifidobacterium indicum species at 4 weeks0.20 Mean percentages of gut microbiota unitsStandard Error 0.052
Control GroupGut MicrobiomePercentage of Clostridium genus at 4 weeks2.59 Mean percentages of gut microbiota unitsStandard Error 0.893
Control GroupGut MicrobiomePercentage of Anaerobranca zavarzinii species at 4 weeks0.18 Mean percentages of gut microbiota unitsStandard Error 0.004
Control GroupGut MicrobiomePercentage of Desulfovibrio genus at 4 weeks0.76 Mean percentages of gut microbiota unitsStandard Error 0.008
Comparison: Null hypothesis: there is no statistical significance between the mean percentages of microbiota units of the main and control groups after the mare's milk administration.~Alternate hypothesis: statistical significance exists between the mean percentages of microbiota units of the main and control groups after the mare's milk administration.p-value: <0.05t-test, 2 sided
Comparison: Null Hypothesis: The freeze-dried mare's milk does not significantly influence the mean percentages of gut microbiota units.~Alternate Hypothesis: The freeze-dried mare's milk significantly influences the mean percentages of gut microbiota units.p-value: <0.05ANOVA
Primary

Quality of Life Changes

Constructs: Physical Functioning (PF), Role Limitations due to Physical Health (RP), Bodily Pain (BP), General Health (GH), Vitality (VT), Social Functioning (SF), Role Limitations due to Emotional Problems (RE), Mental Health (MH). All scale ranges (for any construct): 0 to 100. Higher scores indicate: PF - better physical functioning; RP - fewer role limitations due to physical health; BP - less bodily pain; GH - better perceived general health; VT - greater vitality and less fatigue; SF - better social functioning; RE - fewer role limitations due to emotional problems; MH - better mental health. The SF-36 does not have a single total score but can be summarized using two summary measures: 1. Physical Component Summary (PCS). Combines the following scales: PF, RP, BP, GH. 2. Mental Component Summary (MCS). Combines the following scales: VT, SF, RE, MH. Higher scores indicate better physical and mental health. Range: Typically standardized (mean = 50, SD = 10)

Time frame: 4 weeks

ArmMeasureGroupValue (MEAN)Dispersion
Main GroupQuality of Life ChangesPCS47.965 T-scoreStandard Error 0.004
Main GroupQuality of Life ChangesMCS49.524 T-scoreStandard Error 0.001
Control GroupQuality of Life ChangesPCS50.797 T-scoreStandard Error 0.647
Control GroupQuality of Life ChangesMCS49.393 T-scoreStandard Error 0.091
Comparison: Null hypothesis: No statistically significant difference exists between the scores on a scale (PCS, MCS) after the mare's milk administration.~Alternate hypothesis: Statistically significant difference exists between the scores on a scale (PCS, MCS) after the mare's milk administration.p-value: <0.01t-test, 2 sided
Comparison: Null hypothesis: No statistically significant difference exists between the scores on a scale (PCS, MCS) after 2 measurements in the control group.~Alternate hypothesis: Statistically significant difference exists between the scores on a scale (PCS, MCS) after 2 measurements in the control group.p-value: >0.05t-test, 2 sided
Comparison: Null Hypothesis: The freeze-dried mare's milk does not significantly influence the scores on the scales (PCS, MCS).~Alternate Hypothesis: The freeze-dried mare's milk significantly influences the scores on the scales (PCS, MCS).p-value: <0.01ANOVA
Secondary

Biochemical Blood Analysis (Alkaline Phosphatase)

This biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)

Time frame: 4 weeks

ArmMeasureValue (MEAN)
Main GroupBiochemical Blood Analysis (Alkaline Phosphatase)85 IU/L
Control GroupBiochemical Blood Analysis (Alkaline Phosphatase)92 IU/L
Secondary

Biochemical Blood Analysis (ALT)

This biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)

Time frame: 4 weeks

ArmMeasureValue (MEAN)
Main GroupBiochemical Blood Analysis (ALT)31 units per liter (IU/L)
Control GroupBiochemical Blood Analysis (ALT)35 units per liter (IU/L)
Secondary

Biochemical Blood Analysis (AST)

This biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)

Time frame: 4 weeks

ArmMeasureValue (MEAN)
Main GroupBiochemical Blood Analysis (AST)34 units per liter (IU/L)
Control GroupBiochemical Blood Analysis (AST)33 units per liter (IU/L)
Secondary

Biochemical Blood Analysis (Glucose)

This biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)

Time frame: 4 weeks

ArmMeasureValue (MEAN)
Main GroupBiochemical Blood Analysis (Glucose)5.4 mmol/L
Control GroupBiochemical Blood Analysis (Glucose)5.7 mmol/L
Secondary

Biochemical Blood Analysis (Triacylglycerides)

This biochemical indicator will be determined from patient serum on a BA400 analyzer (BioSystems S.A., Spain)

Time frame: 4 weeks

ArmMeasureValue (MEAN)
Main GroupBiochemical Blood Analysis (Triacylglycerides)1.5 mmol/L
Control GroupBiochemical Blood Analysis (Triacylglycerides)1.4 mmol/L

Source: ClinicalTrials.gov · Data processed: Feb 4, 2026