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Metatranscriptomic Next Generation Sequencing in First Trimester Trophoblast With Increased Fetal Nuchal Translucency (METAHCN)

Pathogen Detection by Metatranscriptomic Next Generation Sequencing in the Trophoblast Collected in Women Carrying a Fetus With Increasing Nuchal Translucency in the First Trimester of Pregnancy

Status
Completed
Phases
Unknown
Study type
Observational
Source
ClinicalTrials.gov
Registry ID
NCT05388968
Acronym
METAHCN
Enrollment
78
Registered
2022-05-24
Start date
2022-11-07
Completion date
2025-09-30
Last updated
2026-06-24

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Increased Nuchal Translucency in the First Trimester of Pregnancy

Keywords

nuchal translucency, metatranscriptomic, next generation sequencing, metagenomic, trophoblast, high throughput sequencing

Brief summary

The study is based on the hypothesis that increased nuchal translucency may be associated with a materno fetal infection and that the pathogen responsible for this infection could be identify with metatranscriptomic next-generation sequencing in the trophoblast tissue.

Detailed description

Nuchal translucency \> 3.5 mm in the first trimester of pregnancy is due to fluid accumulation in the subcutaneous tissue in the nuchal area. This is seen in around 1% of all pregnancies. Increased nuchal translucency is explained by a chromosomic abnormality (mainly Down syndrome) in 30 to 40% of cases. Therefore, the state of the art is to perform an array CGH on chorionic villi sampling. Cases of nuchal translucency that are not explained by a chromosomic abnormality may be associated: with fetal defect (heart, congenital diaphragmatic hernia) in 10% of cases, with genetic disease in 4% of cases or with miscarriage or fetal death of unknown etiology in 18% of cases. The etiology of increased nuchal translucency remains unknown in more than 50% of the cases. It could be linked to inflammation or reflect an infection but this latter association has been rarely studied. This association was suggested in a study reporting serology of CMV, toxoplasmosis or B19 parvovirus primary infections in pregnant women carrying a fetus with increased nuchal translucency. In those rare cases, the microorganism was not searched directly in the trophoblast tissue. In the investigators' center, the investigators describe in a context of maternal primary infection, one case of increased nuchal translucency with a positive CMV PCR in the trophoblast tissue collected at 12 weeks. Other pathogens yet not identified might be associated with increased nuchal translucency. Metatranscriptomic next generation sequencing (mNGS) allows to search for any pathogens without a priori. It is therefore a powerful technic to study this potential association between increased nuchal translucency and infection.

Interventions

DIAGNOSTIC_TESTSpecific microbiologic diagnosis

If a microorganism is detected by metatranscriptomic NGS, specific diagnosis (PCR and serology) will be done in maternal and neonatal samples (blood, urine, saliva)

BIOLOGICALMetatranscriptomic

Analysis with metatranscriptomic next generation sequencing of trophoblast obtained by chorionic villi sampling

Sponsors

Assistance Publique - Hôpitaux de Paris
Lead SponsorOTHER
Pathogen Discovery Laboratory
CollaboratorUNKNOWN
Institut Pasteur
CollaboratorINDUSTRY
URC-CIC Paris Descartes Necker Cochin
CollaboratorOTHER

Study design

Observational model
COHORT
Time perspective
PROSPECTIVE

Eligibility

Sex/Gender
FEMALE
Age
18 Years to No maximum
Healthy volunteers
No

Inclusion criteria

* Pregnant women * Singleton pregnancy * First trimester (11 GA+0D to 13 GA+6D) * Carrying a fetus with a nuchal translucency \> 3.5 mm for which a chorionic villi sampling is performed OR a suspicion of genetic abnormalities for which a chorionic villi sampling is performed * Delivery planned at Necker hospital * Not opposed to participation

Exclusion criteria

* Age \<18 years * no health insurance * difficulties in understanding the French language * chronic infection (HIV, HBV, HVC and HTLV-1)

Design outcomes

Primary

MeasureTime frameDescription
microorganisms (viruses, bacteria, or parasites) in trophoblast samplesAt inclusion, 11-14 weeks of pregnancyIdentification by metatranscriptomic NGS, from women carrying a fetus with nuchal translucency (group 1) and in controls (group 2 and 3)

Secondary

MeasureTime frameDescription
Miscarriageat termination of pregnancy (assessed up to 7 months)Comparison in group 1 of the proportion of miscarriageaccording to the presence or not of a microorganism in the trophoblast.
intrauterine deathat termination of pregnancy (assessed up to 7 months)Comparison in group 1 of the proportion of intrauterine death according to the presence or not of a microorganism in the trophoblast.
fetal abnormalitiesat deliveryComparison in group 1 of the proportion of fetal abnormalities, according to the presence or not of a microorganism in the trophoblast.
Gestational ageat deliveryComparison in group 1 of gestational age at birth, according to the presence or not of a microorganism in the trophoblast.
birth weightat deliveryComparison in group 1 of birth weight, according to the presence or not of a microorganism in the trophoblast.
Detection of the microorganism identified by metatranscriptomic NGS by conventional diagnostic method in maternal samplesat inclusionAmplification by real time PCR of the microorganism identified by metatranscriptomic NGS in maternal blood, urine, saliva and amniotic fluid if available
Detection of the microorganism identified by metatranscriptomic NGS by conventional diagnostic method in neonatal samples3 days after birthAmplification by real time PCR of the microorganism identified by metatranscriptomic NGS in neonatal blood, urine, saliva

Countries

France

Contacts

STUDY_DIRECTORMarianne LERUEZ-VILLE, MD, PhD

Assistance Publique - Hôpitaux de Paris

PRINCIPAL_INVESTIGATORYves Ville, MD, PhD

Assistance Publique - Hôpitaux de Paris

Outcome results

None listed

Source: ClinicalTrials.gov · Data processed: Jun 25, 2026