Skip to content

Ocular Pathogen and Transcriptome Investigation Using Comprehensive Sequencing

Ocular Pathogen and Transcriptome Investigation Using Comprehensive Sequencing

Status
Completed
Phases
Unknown
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT05286203
Acronym
OPTICS
Enrollment
100
Registered
2022-03-18
Start date
2022-06-06
Completion date
2024-02-28
Last updated
2026-06-26

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Infectious Disease, Uveitis

Keywords

Uveitis, Metagenomic deep sequencing, Intraocular infection, MDS

Brief summary

This is a multi-center randomized controlled evaluator-masked trial designed to compare metagenomic deep sequencing (MDS) versus standard of care testing for improvement of outcomes for intraocular infections. Patients with presumed intraocular infections who meet the eligibility criteria will be randomized to receive MDS testing results or not to receive MDS testing results. All patients will receive standard-of-care testing to guide management. Enrolled patients will be followed at week 2, week 3-6 (randomization visit), and at 4 weeks after the randomization visit. The proportions of patients who received the appropriate therapy and the proportions of patients with improved outcome will be compared between arms. Patient quality of life, MDS performance, and the provider certainly of belief will be collected.

Interventions

DEVICEMetagenomic Deep Sequencing (MDS)

MDS is an RNA-seq based testing of ocular fluid or tissue to identify potential infectious pathogens including bacteria, fungi, parasites, and DNA and RNA viruses.

DIAGNOSTIC_TESTStandard of Care (SOC)

SOC includes any available diagnostic tests, such as Gram stain, cultures, PCRs, that are considered the appropriate testing based on the clinical findings.

Sponsors

University of California, San Francisco
Lead SponsorOTHER
University of Nebraska
CollaboratorOTHER
University of Utah
CollaboratorOTHER
University of California, Davis
CollaboratorOTHER
University of California, Los Angeles
CollaboratorOTHER
Research to Prevent Blindness
CollaboratorOTHER

Study design

Allocation
RANDOMIZED
Intervention model
PARALLEL
Primary purpose
DIAGNOSTIC
Masking
SINGLE (Outcomes Assessor)

Eligibility

Sex/Gender
ALL
Age
18 Years to No maximum
Healthy volunteers
No

Inclusion criteria

* Presumed infectious anterior uveitis, or intermediate uveitis, or posterior uveitis, or panuveitis * Presumed post-operative endophthalmitis * Unilateral or bilateral * 18 years and older

Exclusion criteria

* Insufficient specimen for MDS * Age \< 18 years of age * Pregnancy * Unable to consent

Design outcomes

Primary

MeasureTime frameDescription
Clinical Improvement 2-step Decrease in the Level of Inflammation or Decrease to Grade 0; Inflammatory Retinal/Choroidal Lesions Reducing in Size; 20% Improvement of CST on Optical Coherence Tomography, a > 10- Letter Improvement in Visual Acuity,4-week after randomizationDichotomous variable (Y/N) as assessed by a masked evaluator
Appropriate Therapy4-week after randomizationDichotomous variable (Y/N) as determined by an independent expert panel

Secondary

MeasureTime frameDescription
Provider Certainty of Belief4-week after randomizationProvider certainty of belief that the patient has an infection (continuous variable from 0 to 100%, 0% signifying uncertain and 100% signifying certain)
Patient Quality of Life4-week after randomizationAs measured by National Eye Institute Vision Function Questionnaire (min = 0, max = 100; higher means better vision function)
Comparative Sensitivity of the Physician, Conventional Diagnostics, and MDS Using Latent Class AnalysisConclusion of study. 4 weeks after randomization.Latent Class Analysis (LCA) was used to estimate the sensitivity of three diagnostic approaches: (1) clinical diagnosis by the treating physician at presentation, (2) conventional diagnostics, and (3) MDS. LCA was performed on all randomized participants with infection status, evaluating the diagnostic performance of treating physicians, conventional diagnostics, and MDS. A total of 100 participants were enrolled in Phase l of the OPTICS trial.
Comparative Specificity of the Physician, Conventional Diagnostics, and MDS Using Latent Class AnalysisConclusion of study. 4 weeks after randomizationLatent Class Analysis (LCA) was used to estimate the specificity of three diagnostic approaches: (1) clinical diagnosis by the treating physician at presentation, (2) conventional diagnostics, and (3) MDS. LCA was performed on all randomized participants with infection status, evaluating the diagnostic performance of treating physicians, conventional diagnostics, and MDS. A total of 100 participants were enrolled in Phase l of the OPTICS trial.

Countries

United States

Contacts

PRINCIPAL_INVESTIGATORThuy Doan, MD, PhD

University of California, San Francisco

Participant flow

Recruitment details

Participants with presumed intraocular infection were enrolled at 6 sites: University of California, San Francisco; University of California, Los Angeles; University of California, Davis; University of Utah; University of Nebraska Medical Center; Khon Kaen University. Recruitment took place from May 2022 through January 2024.

Pre-assignment details

The trial involved two phases with two distinct inclusion criteria. Participants moved onto phase II, where they were randomized to two arms, if they met the following inclusion criteria: active inflammation in at least one eye and/or active retinal or choroidal inflammation and/or macular edema. Participants were excluded from randomization if: pathogen identified that was consistent with clinical findings, complete resolution of inflammation, or no light perception (NLP) vision.

Baseline characteristics

Characteristic
Age, Continuous62.0 years
Race/Ethnicity, Customized
African American, African, or Afro-Caribbean
9 Participants
Race/Ethnicity, Customized
Asian
26 Participants
Race/Ethnicity, Customized
Caucasian
45 Participants
Race/Ethnicity, Customized
Hispanic ethnicity
21 Participants
Sex: Female, Male
Female
57 Participants
Sex: Female, Male
Male
43 Participants

Adverse events

Event typeEG000
affected / at risk
EG001
affected / at risk
EG002
affected / at risk
deaths
Total, all-cause mortality
0 / 1000 / 120 / 9
other
Total, other adverse events
0 / 1000 / 120 / 9
serious
Total, serious adverse events
0 / 1000 / 120 / 9

Outcome results

None listed

Source: ClinicalTrials.gov · Data processed: Jun 27, 2026