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Microbiome Derived Metabolism and Pharmacokinetics

Incorporating Drug Metabolism by the Human Gut Microbiome Into Personalized Medicine

Status
Completed
Phases
Phase 1
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT05065671
Acronym
MDM-PK
Enrollment
17
Registered
2021-10-04
Start date
2022-02-01
Completion date
2025-09-23
Last updated
2026-04-29

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Microbial Colonization

Brief summary

The investigators will perform single-dose pharmacokinetic (PK) studies in humans following administration of drugs with known microbiome derived metabolism (MDM) in parallel with preclinical studies. By directly comparing laboratory measurements to clinical results, the investigators will be able to confirm the relevance of MDM in vivo, create microbiome-dependent PK profiles of the MDM positive drugs, and establish methodology to capture the contribution of MDM to inter-individual variability in clinical drug PK profiles.

Detailed description

The human gut microbiome has been shown to play an important role in the observed inter-individual variability in therapeutic response, including both efficacy and toxicity. One of the mechanisms by which the gut microbiome exerts these effects is through the direct biochemical transformation of orally administered drugs into more or less active or toxic metabolites, termed herein microbiome-derived drug metabolism (MDM). Recent systematic studies have revealed an enormous and largely unexplored biochemical capacity of human gut bacteria - cultured in ex vivo microbial communities or as single isolates - to metabolize dozens of orally administered drugs but the clinical relevance of the observed MDM remains unmapped. This gap in knowledge is a result of overt disconnect between preclinical and clinical studies: MDM studies performed in the laboratory are removed from direct clinical comparisons, and human studies performed during drug development and therapeutic interventions almost completely ignore microbiome contribution. Moreover, there is currently a lack standardized experimental methods and mathematical models to start incorporating MDM into clinical decisions. Our PK studies are aimed at developing such strategies into clinical practice.

Interventions

DRUGTolcapone 100 MG

Tolcapone 100 mg by mouth once

Duloxetine 20 mg by mouth once

Sponsors

Rutgers, The State University of New Jersey
Lead SponsorOTHER

Study design

Allocation
NON_RANDOMIZED
Intervention model
CROSSOVER
Primary purpose
OTHER
Masking
NONE

Eligibility

Sex/Gender
ALL
Age
18 Years to 65 Years
Healthy volunteers
Yes

Inclusion criteria

* 18 to 65 years of age * Body mass index between 18.5 - 29.9 kg/m2

Exclusion criteria

* Estimated creatinine clearance \< 50 mL/min * Liver impairment (liver enzymes \> 2 times upper limit) * Antibiotics in the past 3 months * History of gastrointestinal disease * History of autoimmune disorder * Chronic viral infection * Smoker * Alcohol intake (defined as having up to 1 drink per day for women and up to 2 drinks per day for men) * Use of immune modulating medications * Diabetes mellitus * Any history or contraindication to the study medications * Additional

Design outcomes

Primary

MeasureTime frameDescription
Drug area under the plasma concentration versus time curve (AUC)After a single dose of a microbiome derived metabolism positive drug (over an 8 hour period for each drug)We will calculate the plasma area under the curve for the microbiome derived metabolism positive probe drugs
Drug peak plasma concentrationAfter a single dose of a microbiome derived metabolism positive drug (over an 8 hour period for each drug)We will measure the peak plasma concentration for microbiome derived metabolism positive probe drugs
Drug trough plasma concentrationsAfter a single dose of a microbiome derived metabolism positive drug (over an 8 hour period for each drug)We will measure the trough plasma concentration for microbiome derived metabolism positive probe drugs
Drug volume of distributionAfter a single dose of a microbiome derived metabolism positive drug (over an 8 hour period for each drug)We will calculate the volume of distribution for microbiome derived metabolism positive probe drugs
Drug half-lifeAfter a single dose of a microbiome derived metabolism positive drug (over an 8 hour period for each drug)We will calculate drug half-life for microbiome derived metabolism positive probe drugs
Drug plasma clearanceAfter a single dose of a microbiome derived metabolism positive drug (over an 8 hour period for each drug)We will calculate drug plasma clearance for each microbiome derived metabolism positive drug.

Countries

United States

Outcome results

None listed

Source: ClinicalTrials.gov · Data processed: Apr 30, 2026