Genotyping Techniques
Conditions
Keywords
Method Comparison, CYP2C19
Brief summary
The aim of the study is to demonstrate concordance (percent agreement) between results produced by the Spartan CYP2C19 system and bi-directional sequencing. In addition, this study will evaluate the concordance of buccal samples stored prior to running on the Spartan Cube CYP2C19 system and bi-directional sequencing.
Detailed description
Sample holding time - two parts 1. Sample tested in less than one-hour a.In the first part, buccal samples will be collected from subjects and tested using the Spartan Cube CYP2C19 system. These samples will be run immediately (within 1 h) after collection from the subject (\<1 h sample holding time). All results will be compared to bi-directional sequencing to determine percent agreement. 2. Sample tested greater than 21 hours a.In the second part (sample holding portion), samples will be tested using the Spartan Cube CYP2C19 product. These samples will be run after storage at ambient temperature. All results will be compared to bi-directional sequencing to determine the percent agreement.
Interventions
Using buccal material, determine the genotype of the \*2, \*3 and \*17 SNPs of the CYP2C19 gene on the Spartan Cube CYP2C19 System.
Sponsors
Study design
Masking description
Bi-directional sequencing results and Spartan results will not be shared with participants. The investigator will not see the bi-directional sequencing results.
Intervention model description
All subjects will experienced the same number of buccal and saliva samples collected. This means all subjects will participate in Arm 1 and have materials collected at the same time in the event they are enrolled in arm 2. Based on enrollment numbers and their immediate genotype, it will be determined at that time if the subject will participate in the second arm of the study.
Eligibility
Inclusion criteria
* Participants who will provide buccal samples and a saliva sample who have not eaten drank or smoked in the past 30 minutes.
Exclusion criteria
* Participants who have eaten drank or smoked in the past 30 minutes prior to collection.
Design outcomes
Primary
| Measure | Time frame | Description |
|---|---|---|
| % Agreement of test results generated on the Spartan Cube CYP2C19 System and bidirectional sequencing | Through study completion; anticipated to be less than 4 months | Determine % agreement across all tests conducted and bi-directional sequencing results |
Countries
Canada