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Study of Plasma NGS for Assessment, Characterization, Evaluation of Patients With ALK Resistance

ALCMI-011: Study of Plasma Next Generation Sequencing for Assessment, Characterization, Evaluation of Patients With ALK Resistance (SPACEWALK)

Status
Completed
Phases
Unknown
Study type
Observational
Source
ClinicalTrials.gov
Registry ID
NCT03833934
Acronym
SPACEWALK
Enrollment
62
Registered
2019-02-07
Start date
2019-01-23
Completion date
2023-10-31
Last updated
2025-10-02

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Non-Small Cell Lung Cancer

Keywords

ALK positive

Brief summary

ALK-positive lung cancer is a subtype of lung cancer which carries a change in a gene called ALK (anaplastic lymphoma kinase). There are now many drugs for patients with ALK-positive lung cancer that slow cancer growth. However, after some time, just as bacteria evolve resistance to antibiotics, ALK-positive lung cancers evolve ways to avoid the therapies by developing new mutations so the drugs lost their effectiveness. These new mutations can potentially be treated with a different drug. For these new therapies, the range of mutations that can develop at resistance is not well understood. It is now possible to detect the presence of mutations or changes in the genetic structure in lung cancer by analyzing a patient's blood for bits of material shed by tumor. This approach is often called a liquid biopsy. Recently, researchers have shown that looking at tumor molecules through liquid biopsies can provide doctors with some of the same information that tissue biopsies provide. For example, liquid biopsies can be used to detect mutations that cause drug resistance. Obtaining liquid biopsies on patients with ALK-positive lung cancers at resistance to therapy may help better understand the different mutations that develop and guide therapy decisions. In this research study, a blood specimen will be collected and submitted for liquid biopsy analysis at a commercial diagnostic company. This company specializes in analyzing tumor material found in blood. Specifically, it will look for genetic changes in the ALK gene that could help understand why a cancer has developed drug resistance. This research study is for lung cancer patients with ALK-positive lung cancer who had been on a newer ALK targeted treatment (such as ceritinib, alectinib, brigatinib, or lorlatinib) to determine whether they have developed ALK resistance mutations. The investigators will collect a blood sample to examine these mutations. Participants will not have to have a tissue biopsy to participate in this study. Participants do not have to visit Dana-Farber Cancer Institute (DFCI) to participate. All study procedures will be performed remotely.

Detailed description

SPACEWALK is an innovative remote consent and participation study using next-generation sequencing (NGS) of plasma cell-free DNA (cfDNA) to characterize resistance mechanisms arising in ALK-positive non-small cell lung cancer (NSCLC) after progression while on a next generation ALK tyrosine kinase inhibitor (TKI). Additionally, the study will capture the potential of genomic-driven resistance therapy approach for effecting outcomes in patients with advanced ALK-positive NSCLC and TKI resistance. Finally, the study will assess the role of repeat plasma NGS in evaluating drug response. The study will accrue patients with advanced ALK-positive NSCLC on systemic progression (outside the brain) while on treatment with a next-generation ALK TKI. Any patient interested in the study will find information about the study on the study website. The patient will consent remotely through the study website and documentation of advanced ALK-positive NSCLC and systemic progression while on a next-generation ALK TKI. The study team will reach out to the patient to confirm eligibility and send a blood collection kit. In the study kit the study participants will find all the necessary materials for local blood draws, and collected specimens will be sent directly to the central study laboratory (Resolution Bioscience) for plasma NGS. Plasma NGS of cfDNA will involve sequencing of 19 genes, including ALK, permitting remote tumor genotyping. Plasma NGS analysis and results will be done following standard procedures of the Resolution Bioscience CLIA-certified laboratory. Results will be sent to study participants, their physicians and study team within 1-2 weeks. Plasma NGS reports will not include any specific treatment recommendations but will describe the presence of an ALK rearrangement, ALK resistance mutation, or other relevant mutations. Study participants are followed remotely. The study coordinator will contact the participants weekly for 4 weeks after enrolled into the study to learn of any new treatment initiation and to release an additional plasma collection kit 2-4 weeks after starting treatment. Study participants will then be remotely contacted every 3 months to follow clinical outcomes on therapy for up to 2 years. If the cancer progresses on the participant's new treatment, the patient will have the option to provide a third blood specimen. Medical records and local imaging will be collected and studied. The primary objective of the study is to characterize ALK TKI resistance to next-generation ALK TKIs in patients with advanced ALK-positive NSCLC. Secondarily, the investigators will assess the potential of plasma NGS to impact outcome on treatment by studying time to treatment discontinuation. Serial plasma NGS will also be assessed as a response biomarker. A total of 300 patients are planned to be enrolled, with the expectation that approximately 200 will have tumor-related mutations detected in plasma NGS.

Interventions

None listed

Sponsors

Dana-Farber Cancer Institute
CollaboratorOTHER
National Cancer Institute (NCI)
CollaboratorNIH
Addario Lung Cancer Medical Institute
Lead SponsorOTHER

Study design

Observational model
COHORT
Time perspective
PROSPECTIVE

Eligibility

Sex/Gender
ALL
Age
18 Years to No maximum
Healthy volunteers
No

Inclusion criteria

* Men or women older than 18 years at the time of consent. * Demonstration of having advanced ALK positive NSCLC. * Systemic progression (not CNS only progression) within the past 30 days while receiving a next generation ALK TKI. * Patient must not have started a new line of therapy before signing the informed consent form. * Willingness to provide a blood specimen prior to the initiation of a new line of treatment. * Willing to provide clinical and medical information to the study team as required. * Ability to read, write and communicate in English. * Ability to sign a web-based informed consent form.

Exclusion criteria

* Participants who are unable to provide informed consent. * Participants who are 18 years of age or younger. * Participants who are unable to comply with the study procedures. * Known existence of an uncontrolled intercurrent illness including, but not limited to, psychiatric illness or social situations that would impair compliance with study requirements. * Participants who have previously enrolled to the study

Design outcomes

Primary

MeasureTime frameDescription
Overall Prevalence of ALK Resistance Mechanism Among Patients With the ALK Fusion32 monthsTo determine the overall prevalence of ALK resistance mechanism in patients with detectable ALK fusion in plasma as determined per plasma NGS
Prevalence of ALK Fusion32 monthsTo determine the prevalence of the ALK gene fusion in the cohort of patients with ALK-positive NSCLC with progression
ALK Fusion Allelic Frequency32 monthsTo determine the relative percentage of the ALK fusion within the cohort's gene pool
Type of Resistance Mechanism: One or More Secondary ALK Kinase Domain Resistance Mutations32 monthsTo determine the prevalence of the various types of ALK resistance mechanisms as measured by NGS
Type of ALK Resistance Mechanism: Both ALK Resistance Mutations and Bypass Resistance32 monthsTo determine the prevalence of the various types of ALK resistance mechanisms as measured by NGS
Prevalance of ALK Restance Mechanism: Bypass Track Resistance32 monthsTo determine the prevalence of the various types of ALK resistance mechanisms as measured by NGS

Secondary

MeasureTime frameDescription
Treatment Outcome: >50% Reduction of ALK Fusion Allelle Frequency32 monthsNew ALK TKI treatment resulted in \>50% reduction of ALK fusion allelle frequency
Changed Treatment for NSCLC32 monthsInitiated a new ALK tyrosine kinase inhibitor for treatment of NSCLC following enrollment in the study

Countries

United States

Participant flow

Recruitment details

Participants were referred by means of their treating physician or social media to a study website (https://alcmi.net/research/spacewalk-study/) and completed a contact form indicating their interest in participating in the study and answered a prescreening questionnaire. If the patients indicated they have ALK-positive NSCLC and are progressing on an ALK TKI, they were contacted by the study staff who then released access to an online consent form to the patient.

Participants by arm

ArmCount
ALK-positive NSCLC With Progression
Patients in this group signed consent, met eligibility criteria, and all had ALK-positive cancer of a primary lung lesion with systemic progression (excluding the central nervous system)
62
Total62

Baseline characteristics

CharacteristicALK-positive NSCLC With Progression
Age, Continuous55 years
Race and Ethnicity Not Collected— Participants
Region of Enrollment
United States
62 participants
Sex: Female, Male
Female
22 Participants
Sex: Female, Male
Male
40 Participants
Subjects diagnosed with Advanced ALK positive NSCLC with progression62 participants

Adverse events

Event typeEG000
affected / at risk
deaths
Total, all-cause mortality
0 / 0
other
Total, other adverse events
0 / 0
serious
Total, serious adverse events
0 / 0

Outcome results

Primary

ALK Fusion Allelic Frequency

To determine the relative percentage of the ALK fusion within the cohort's gene pool

Time frame: 32 months

Population: Patients with detected ALK fusion

ArmMeasureValue (MEDIAN)
ALK-positive NSCLC With ProgressionALK Fusion Allelic Frequency2.6 percentage of the ALK fusion
Primary

Overall Prevalence of ALK Resistance Mechanism Among Patients With the ALK Fusion

To determine the overall prevalence of ALK resistance mechanism in patients with detectable ALK fusion in plasma as determined per plasma NGS

Time frame: 32 months

Population: Patients with detected ALK fusion

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
ALK-positive NSCLC With ProgressionOverall Prevalence of ALK Resistance Mechanism Among Patients With the ALK Fusion17 Participants
Primary

Prevalance of ALK Restance Mechanism: Bypass Track Resistance

To determine the prevalence of the various types of ALK resistance mechanisms as measured by NGS

Time frame: 32 months

Population: Patients with detected ALK fusion

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
ALK-positive NSCLC With ProgressionPrevalance of ALK Restance Mechanism: Bypass Track Resistance3 Participants
Primary

Prevalence of ALK Fusion

To determine the prevalence of the ALK gene fusion in the cohort of patients with ALK-positive NSCLC with progression

Time frame: 32 months

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
ALK-positive NSCLC With ProgressionPrevalence of ALK Fusion27 Participants
Primary

Type of ALK Resistance Mechanism: Both ALK Resistance Mutations and Bypass Resistance

To determine the prevalence of the various types of ALK resistance mechanisms as measured by NGS

Time frame: 32 months

Population: Patients with detected ALK fusion

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
ALK-positive NSCLC With ProgressionType of ALK Resistance Mechanism: Both ALK Resistance Mutations and Bypass Resistance6 Participants
Primary

Type of Resistance Mechanism: One or More Secondary ALK Kinase Domain Resistance Mutations

To determine the prevalence of the various types of ALK resistance mechanisms as measured by NGS

Time frame: 32 months

Population: Patients with detected ALK fusion

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
ALK-positive NSCLC With ProgressionType of Resistance Mechanism: One or More Secondary ALK Kinase Domain Resistance Mutations8 Participants
Secondary

Changed Treatment for NSCLC

Initiated a new ALK tyrosine kinase inhibitor for treatment of NSCLC following enrollment in the study

Time frame: 32 months

Population: Patients with at least 3 months of follow-up time

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
ALK-positive NSCLC With ProgressionChanged Treatment for NSCLC49 Participants
Secondary

Treatment Outcome: >50% Reduction of ALK Fusion Allelle Frequency

New ALK TKI treatment resulted in \>50% reduction of ALK fusion allelle frequency

Time frame: 32 months

Population: Patients who had additional optional blood draw following initiation of new ALK TKI therapy

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
ALK-positive NSCLC With ProgressionTreatment Outcome: >50% Reduction of ALK Fusion Allelle Frequency7 Participants

Source: ClinicalTrials.gov · Data processed: Feb 4, 2026