Skip to content

GI Tract Biomarkers in Infants With Different Diets

Longitudinal, Prospective Comparison of the Gastrointestinal Tract of Breastfed and Formula Fed Infants Via Fecal Analysis of the Microbiome, Intestinal Epithelial Cell Expression of Gut Hormones, and Fecal Analysis of the Metabolome

Status
Completed
Phases
Unknown
Study type
Observational
Source
ClinicalTrials.gov
Registry ID
NCT03751137
Enrollment
34
Registered
2018-11-23
Start date
2016-03-10
Completion date
2025-05-30
Last updated
2025-06-04

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Obesity, Childhood

Keywords

Microbiome, Gut-brain axis, Satiety, Hormone, Obesity, Metabolome

Brief summary

Childhood obesity is increasing with more than one-third of adolescents currently overweight and one in five with obesity. The lifelong incidence of obesity-related morbidities is also increasing with childhood obesity. It is not yet known how obesity develops in an individual, specifically in early childhood. Further, it is unclear what mechanistic role a child's earliest nutrition or changing intestinal flora has in the etiology of obesity. Very young children are developing appetite and satiety patterns early in life. Nutrition and gut microbial flora have impact on how these processes unfold, but specific mechanisms are not yet well understood. The investigators hypothesize that formula-fed infants with changes in their microbial flora are more likely to have altered carbohydrate metabolism, evidenced by greater imbalances of fatty acid production, and are more likely to have accelerated growth trajectory due to satiety disruption. The investigators further hypothesize that altered carbohydrate metabolism, e.g. imbalances of short- and long-chain fatty acid levels in the gut, stimulate cellular stress and affect specific gut hormones. This study will compare the microbiome of the intestinal microbial flora in two groups of infants, one breast fed and the other formula fed, using longitudinally collected fecal samples from both groups. Samples will be subjected to shotgun metagenomic analysis and simultaneous metabolomic analysis. A bioinformatics approach will elucidate key differences among and between sample groups, and will further analyze bacterial gene expression levels related to carbohydrate metabolism. This study will compare the expression of human proteins involved in cellular stress response and gut peptide signaling by applying quantitative Reverse Transcriptase-Polymerase Chain Reaction to human messenger RNA isolated from the longitudinally collected samples from both groups. Finally, this study will monitor the trajectory of growth and feeding over the first 2 years of life. The project's focus on the influence of different early feeding types, microbial flora changes, and altered carbohydrate metabolism leading to disruption of gut-brain signaling will provide critical data for host:microbiome interactions and translational therapeutic targets.

Interventions

None listed

Sponsors

University of Delaware
CollaboratorOTHER
Nemours Children's Clinic
Lead SponsorOTHER

Study design

Observational model
CASE_CONTROL
Time perspective
CROSS_SECTIONAL

Eligibility

Sex/Gender
ALL
Age
6 Weeks to 3 Months
Healthy volunteers
Yes

Inclusion criteria

* Otherwise healthy, male or female term infants * Exclusively breast or formula feeding * Never been exposed to oral or intravenous antibiotics or probiotics

Exclusion criteria

* Maternal antibiotic use while breast-feeding * Infant or maternal use of probiotics * Current or recent (\<14 days) gastrointestinal infection (viral, bacterial, or fungal) * Gastrointestinal mucosal disease, or significant constipation * Consuming formula that is not standard cow's milk formula * Infants on acid suppression medications or infants receiving high-density formula (\>20 calories/ounce) may be enrolled and will be analyzed separately

Design outcomes

Primary

MeasureTime frameDescription
MicrobiomeEnrollmentMetagenomic analysis of microbial organisms in infant's feces

Secondary

MeasureTime frameDescription
MetabolomeEnrollmentMetabolic products present in infant's feces
Gut hormone gene expressionEnrollmentTranscriptional output of human epithelial cells in infant's feces

Countries

United States

Outcome results

None listed

Source: ClinicalTrials.gov · Data processed: Feb 4, 2026