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Gastric Acid Suppression and Probiotic Colonization

The Effect of Gastric Acid Suppression on Probiotic Colonization

Status
Completed
Phases
Phase 4
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT03327051
Acronym
PR
Enrollment
39
Registered
2017-10-31
Start date
2018-03-20
Completion date
2018-12-30
Last updated
2020-03-11

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Probiotics

Brief summary

Probiotics are over-the-counter dietary products with microorganisms that are generally consumed for health benefit. However, the durability of these microorganisms is unclear, particularly when they pass through the highly acidic environment of the stomach. We will test the colonization of these microorganisms among individuals who consume probiotics with and without acid suppression therapy.

Detailed description

All activities will be related to research. Participants will be randomized to receive either over-the-counter acid suppression medication or placebo from weeks -2 through week 4. All participants will receive VSL #3 (over-the-counter probiotic) from weeks 0 through 4. Survey data, serum, and stool samples will be collected at weeks -2, 0, and 4. The intervention medication and probiotics have a very low side effect profile and are available over the counter. All data collection methods are non-invasive. Elucidation of the effects of acid suppression on probiotic colonization will allow us to better understand the utility of probiotics use by individuals on acid suppression medications.

Interventions

DRUGOmeprazole

Proton pump inhibitor (PPI) that suppresses gastric acid secretion

DIETARY_SUPPLEMENTVSL #3

Probiotics

DRUGPlacebo

Placebo to match omeprazole

Sponsors

Stanford University
Lead SponsorOTHER

Study design

Allocation
RANDOMIZED
Intervention model
PARALLEL
Primary purpose
BASIC_SCIENCE
Masking
QUADRUPLE (Subject, Caregiver, Investigator, Outcomes Assessor)

Eligibility

Sex/Gender
ALL
Age
18 Years to 75 Years
Healthy volunteers
Yes

Inclusion criteria

* Healthy volunteers ages 18 years and ≤ 75 years. * Able to visit the study Doctor's office 3 times, answer 3 questionnaires, and provide stools and blood samples.

Exclusion criteria

* Gastric cancer, Barrett's esophagus cancer, any gastrointestinal condition, or soy or gluten sensitivity * Previous abdominal surgery * Currently pregnant or nursing * Had H. Pylori Infection * Diagnosed with any chronic medical condition other than hypertension or hyperlipidemia * Currently consuming herbs or probiotics

Design outcomes

Primary

MeasureTime frameDescription
Relative Abundance of VSL#3 Probiotic Bacterial Strains When Ingested in the Presence or Absence of the Proton Pump Inhibitor (PPI) Omeprazole at Week 4.Week 4Relative abundance is reported as the percent of combined VSL #3 probiotic bacteria strains in the bacteria sample (S. thermophiles, B. breve, B. longum, B. infantis, L. acidophilus, L. plantarum, L. paracasei, L. delbrueckii subsp. bulgaricus) following their ingestion in the presence or absence of the gastric acid suppression drug omeprazole. Stool samples were assessed.

Secondary

MeasureTime frameDescription
Number of Participants With Symptoms Related to VSL#3 Treatment.Week 0 through Week 4Participants were asked to report symptoms of gastro-intestinal discomfort experienced within the last 28 days.
Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationWeek 0 and Week 4From week 0 to week 4, change in the relative abundance (percentage) of most common types of bacteria phyla normally found in the lower GI track (e.g. Firmicutes, Bacteroidetes, Actinobacteria and Proteobacteria) after ingesting VSL#3 in the presence or absence of omeprazole. Stool samples are assessed.
Change in Peak Intensity of the Metabolite 1H-Indole-4-carbaldehyde Before and After VSL#3 Probiotic Administration (Omeprazole and VSL #3).Week 0 and Week 4From week 0 to week 4, relative change in metabolites (e.g. short chain fatty acids, bile acid derivatives, flavonoids, amino acids) found in the GI track by mass spectrometry after ingesting VSL#3. Serum samples are assessed. MZ = mass/charge ratio; RT = retention time. MZ/RT data were obtained by mass spectrometry analysis. This is a metabolite of interest for the Omeprazole and VSL#3 group only.
Change in Peak Intensity of Metabolites of Interest Before and After VSL#3 Probiotic Administration (Placebo and VSL#3 Group).Week 0 and Week 4From week 0 to week 4, relative change in metabolites (e.g. short chain fatty acids, bile acid derivatives, flavonoids, amino acids) found in the GI track by mass spectrometry after ingesting VSL#3. Serum samples are assessed. MZ = mass/charge ratio; RT = retention time. MZ/RT data were obtained by mass spectrometry analysis. These are metabolites of interest for the Placebo and VSL#3 group only.

Countries

United States

Participant flow

Recruitment details

Participants attended an initial study visit at week -2, followed by a baseline visit at week 0, and a final visit at week 4.

Participants by arm

ArmCount
Omeprazole and VSL #3
Proton pump inhibitor (Omeprazole) and VSL #3 Probiotics
15
Placebo and VSL #3
Placebo and VSL #3 Probiotics
15
Total30

Baseline characteristics

CharacteristicPlacebo and VSL #3Omeprazole and VSL #3Total
Age, Continuous37 years
STANDARD_DEVIATION 12
36 years
STANDARD_DEVIATION 13
37 years
STANDARD_DEVIATION 12
Number of participants experiencing gastro-intestinal symptoms.
Bloating
3 Participants1 Participants4 Participants
Number of participants experiencing gastro-intestinal symptoms.
Diarrhea
0 Participants1 Participants1 Participants
Number of participants experiencing gastro-intestinal symptoms.
Flatulence
0 Participants1 Participants1 Participants
Race/Ethnicity, Customized
Hispanic / Other
1 Participants2 Participants3 Participants
Race/Ethnicity, Customized
Hispanic / White
2 Participants3 Participants5 Participants
Race/Ethnicity, Customized
NonHispanic / Asian
4 Participants2 Participants6 Participants
Race/Ethnicity, Customized
NonHispanic / Black or African American
0 Participants1 Participants1 Participants
Race/Ethnicity, Customized
NonHispanic / Native Hawaiian / Pacific Islander
1 Participants0 Participants1 Participants
Race/Ethnicity, Customized
NonHispanic / Other
1 Participants0 Participants1 Participants
Race/Ethnicity, Customized
NonHispanic / White
6 Participants7 Participants13 Participants
Region of Enrollment
United States
15 Participants15 Participants30 Participants
Relative Abundance of Probiotic Strains0.5875 percentage of abundance
STANDARD_DEVIATION 0.5691
0.3653 percentage of abundance
STANDARD_DEVIATION 0.407
0.4764 percentage of abundance
STANDARD_DEVIATION 0.4907
Sex: Female, Male
Female
9 Participants11 Participants20 Participants
Sex: Female, Male
Male
6 Participants4 Participants10 Participants

Adverse events

Event typeEG000
affected / at risk
EG001
affected / at risk
deaths
Total, all-cause mortality
0 / 190 / 20
other
Total, other adverse events
7 / 199 / 20
serious
Total, serious adverse events
0 / 190 / 20

Outcome results

Primary

Relative Abundance of VSL#3 Probiotic Bacterial Strains When Ingested in the Presence or Absence of the Proton Pump Inhibitor (PPI) Omeprazole at Week 4.

Relative abundance is reported as the percent of combined VSL #3 probiotic bacteria strains in the bacteria sample (S. thermophiles, B. breve, B. longum, B. infantis, L. acidophilus, L. plantarum, L. paracasei, L. delbrueckii subsp. bulgaricus) following their ingestion in the presence or absence of the gastric acid suppression drug omeprazole. Stool samples were assessed.

Time frame: Week 4

Population: Participants who attended the week 4 visit are included in the analysis.

ArmMeasureValue (MEAN)Dispersion
Omeprazole and VSL #3Relative Abundance of VSL#3 Probiotic Bacterial Strains When Ingested in the Presence or Absence of the Proton Pump Inhibitor (PPI) Omeprazole at Week 4.1.002 percentage of abundanceStandard Deviation 0.8403
Placebo and VSL #3Relative Abundance of VSL#3 Probiotic Bacterial Strains When Ingested in the Presence or Absence of the Proton Pump Inhibitor (PPI) Omeprazole at Week 4.0.8186 percentage of abundanceStandard Deviation 0.5234
Comparison: Within group difference between week 0 and week 4 was analyzed.p-value: 0.04ANOVA
Comparison: Within group difference between week 0 and week 4 was analyzed.p-value: >0.99ANOVA
Secondary

Change in Peak Intensity of Metabolites of Interest Before and After VSL#3 Probiotic Administration (Placebo and VSL#3 Group).

From week 0 to week 4, relative change in metabolites (e.g. short chain fatty acids, bile acid derivatives, flavonoids, amino acids) found in the GI track by mass spectrometry after ingesting VSL#3. Serum samples are assessed. MZ = mass/charge ratio; RT = retention time. MZ/RT data were obtained by mass spectrometry analysis. These are metabolites of interest for the Placebo and VSL#3 group only.

Time frame: Week 0 and Week 4

Population: Participants in the Placebo and VSL#3 group who attended the week 4 visit are included in the analysis.

ArmMeasureGroupValue (MEAN)Dispersion
Omeprazole and VSL #3Change in Peak Intensity of Metabolites of Interest Before and After VSL#3 Probiotic Administration (Placebo and VSL#3 Group).11-OXOURSOLIC ACID ACETATE at Week 095819.8 MZ/RTStandard Deviation 146506.5
Omeprazole and VSL #3Change in Peak Intensity of Metabolites of Interest Before and After VSL#3 Probiotic Administration (Placebo and VSL#3 Group).Iloprost S-isomer at Week 422405.5 MZ/RTStandard Deviation 63899.1
Omeprazole and VSL #3Change in Peak Intensity of Metabolites of Interest Before and After VSL#3 Probiotic Administration (Placebo and VSL#3 Group).11-OXOURSOLIC ACID ACETATE at Week 44726.2 MZ/RTStandard Deviation 18243.3
Omeprazole and VSL #3Change in Peak Intensity of Metabolites of Interest Before and After VSL#3 Probiotic Administration (Placebo and VSL#3 Group).FA(14:0) at Week 0539032.9 MZ/RTStandard Deviation 519162.2
Omeprazole and VSL #3Change in Peak Intensity of Metabolites of Interest Before and After VSL#3 Probiotic Administration (Placebo and VSL#3 Group).FA(14:0) at Week 4249632.3 MZ/RTStandard Deviation 219622.8
Omeprazole and VSL #3Change in Peak Intensity of Metabolites of Interest Before and After VSL#3 Probiotic Administration (Placebo and VSL#3 Group).Iloprost S-isomer at Week 087765.6 MZ/RTStandard Deviation 189360
Secondary

Change in Peak Intensity of the Metabolite 1H-Indole-4-carbaldehyde Before and After VSL#3 Probiotic Administration (Omeprazole and VSL #3).

From week 0 to week 4, relative change in metabolites (e.g. short chain fatty acids, bile acid derivatives, flavonoids, amino acids) found in the GI track by mass spectrometry after ingesting VSL#3. Serum samples are assessed. MZ = mass/charge ratio; RT = retention time. MZ/RT data were obtained by mass spectrometry analysis. This is a metabolite of interest for the Omeprazole and VSL#3 group only.

Time frame: Week 0 and Week 4

Population: Participants in the Omeprazole and VSL#3 group who attended the week 4 visit are included in the analysis.

ArmMeasureGroupValue (MEAN)Dispersion
Omeprazole and VSL #3Change in Peak Intensity of the Metabolite 1H-Indole-4-carbaldehyde Before and After VSL#3 Probiotic Administration (Omeprazole and VSL #3).1H-Indole-4-carbaldehyde at Week 080809.5 MZ/RTStandard Deviation 118044.6
Omeprazole and VSL #3Change in Peak Intensity of the Metabolite 1H-Indole-4-carbaldehyde Before and After VSL#3 Probiotic Administration (Omeprazole and VSL #3).1H-Indole-4-carbaldehyde at Week 4286707.9 MZ/RTStandard Deviation 567693.1
Secondary

Number of Participants With Symptoms Related to VSL#3 Treatment.

Participants were asked to report symptoms of gastro-intestinal discomfort experienced within the last 28 days.

Time frame: Week 0 through Week 4

Population: Participants who attended the week 4 visit are included in the analysis.

ArmMeasureGroupValue (COUNT_OF_PARTICIPANTS)
Omeprazole and VSL #3Number of Participants With Symptoms Related to VSL#3 Treatment.Bloating0 Participants
Omeprazole and VSL #3Number of Participants With Symptoms Related to VSL#3 Treatment.Diarrhea2 Participants
Omeprazole and VSL #3Number of Participants With Symptoms Related to VSL#3 Treatment.Flatulence2 Participants
Placebo and VSL #3Number of Participants With Symptoms Related to VSL#3 Treatment.Flatulence0 Participants
Placebo and VSL #3Number of Participants With Symptoms Related to VSL#3 Treatment.Bloating2 Participants
Placebo and VSL #3Number of Participants With Symptoms Related to VSL#3 Treatment.Diarrhea0 Participants
Secondary

Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic Administration

From week 0 to week 4, change in the relative abundance (percentage) of most common types of bacteria phyla normally found in the lower GI track (e.g. Firmicutes, Bacteroidetes, Actinobacteria and Proteobacteria) after ingesting VSL#3 in the presence or absence of omeprazole. Stool samples are assessed.

Time frame: Week 0 and Week 4

Population: Participants who attended the week 4 visit are included in the analysis.

ArmMeasureGroupValue (MEAN)Dispersion
Omeprazole and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationProteobacteria at Week 43.12 percentage of abundanceStandard Deviation 3.7
Omeprazole and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationActinobacteria at Week 43.7 percentage of abundanceStandard Deviation 3.7
Omeprazole and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationProteobacteria at Week 04.1 percentage of abundanceStandard Deviation 6
Omeprazole and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationBacteroidetes at Week 066.4 percentage of abundanceStandard Deviation 15.1
Omeprazole and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationFirmicutes at Week 425.7 percentage of abundanceStandard Deviation 12.6
Omeprazole and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationActinobacteria at Week 02.5 percentage of abundanceStandard Deviation 2.5
Omeprazole and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationBacteroidetes at Week 466.2 percentage of abundanceStandard Deviation 15
Omeprazole and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationFirmicutes at Week 025.6 percentage of abundanceStandard Deviation 9.6
Placebo and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationActinobacteria at Week 43.2 percentage of abundanceStandard Deviation 1.9
Placebo and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationFirmicutes at Week 027.2 percentage of abundanceStandard Deviation 9.6
Placebo and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationBacteroidetes at Week 065.6 percentage of abundanceStandard Deviation 11.3
Placebo and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationBacteroidetes at Week 468.1 percentage of abundanceStandard Deviation 10.2
Placebo and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationFirmicutes at Week 425.0 percentage of abundanceStandard Deviation 8.3
Placebo and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationProteobacteria at Week 02.7 percentage of abundanceStandard Deviation 1.8
Placebo and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationProteobacteria at Week 42.7 percentage of abundanceStandard Deviation 2.4
Placebo and VSL #3Relative Abundance (Mean Value) of Most Abundant Bacterial Phylum Before and After VSL#3 Probiotic AdministrationActinobacteria at Week 03.2 percentage of abundanceStandard Deviation 2.8

Source: ClinicalTrials.gov · Data processed: Feb 20, 2026