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Pharmacogenomic Testing in Primary Care

Determining the Feasibility, Acceptability, and Preliminary Effectiveness of Pharmacogenomic Testing in Primary Care

Status
Completed
Phases
NA
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT03270891
Enrollment
75
Registered
2017-09-01
Start date
2017-12-01
Completion date
2022-05-06
Last updated
2023-04-11

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Antidepressants Causing Adverse Effects in Therapeutic Use

Keywords

Pharmacogenomics, Primary care physicians

Brief summary

This is a 6-month randomized, wait-listed, controlled pilot trial conducted in 6 department of family medicine (DFM) clinics at the University of Michigan (UM). Physicians practicing at a UM DFM clinical site who are willing to utilize pharmacogenomic (PGx) test results to manage antidepressant use will be enrolled. Patients of these DFM physicians who are adults with a new prescription for a target antidepressant will also be enrolled.

Detailed description

This is a 6-month randomized, wait-listed, controlled pilot trial conducted in 6 department of family medicine (DFM) clinics at the University of Michigan (UM). We will enroll physicians practicing at a UM DFM clinical site who are willing to utilize PGx test results in conjunction with treating patients prescribed certain antidepressants. We will also enroll patients of these DFM physicians who are adults with a new prescription for an antidepressant (within the past 4 weeks) including patients who have switched to a new antidepressant from another antidepressant or have added on a new antidepressant to current antidepressant therapy. Patients are excluded if taking an antidepressant for more than 4 weeks or if they have had PGx testing in the past. Patients will be randomized to either an intervention or control group. Patients in the intervention group will have PGx test results available soon after enrollment while the control patients will have test results available 3 months after the first visit. All patients will complete a baseline, 3-, and 6-month assessment; control patients will have an additional 9-month assessment. Data to be collected include symptoms and severity (PHQ-8, GAD7), functional health status (SF-12), PGx knowledge, work status changes, demographic information, physician and emergency department visits, adverse effects, and medication alterations and adherence.

Interventions

DIAGNOSTIC_TESTPGx test

A laboratory developed genetic test that differentiates common and uncommon alleles in genes that have been previously identified as being involved in either the metabolism or response of drugs used in the treatment of depression and/or anxiety. The results are provided as a report that contains information related to the allele status of the patient's genes, translates this into a phenotype, and relates this phenotype to recommendation classes for drugs.

Sponsors

University of Michigan
Lead SponsorOTHER

Study design

Allocation
RANDOMIZED
Intervention model
PARALLEL
Primary purpose
TREATMENT
Masking
NONE

Eligibility

Sex/Gender
ALL
Age
18 Years to No maximum
Healthy volunteers
No

Inclusion criteria

Physician participants Inclusion criteria: * Be a practicing physician at a University of Michigan Department of Family Medicine clinic * Be willing to use PGx test results for their patients enrolled in the study * Be willing to allow study staff to contact their patients * Self-report that they are willing to prescribe antidepressants

Exclusion criteria

-Do not meet inclusion criteria Patient Participants Inclusion: * Be a patient of a participating physician * Have a new prescription for one of the following antidepressant medications: citalopram (Celexa), escitalopram (Lexapro), fluoxetine (Prozac, Prozac Weekly, Rapiflux, Sarafem, Selfemra), fluvoxamine (Luvox, Luvox CR), paroxetine (Paxil, Paxil CR), sertraline (Zoloft), duloxetine (Cymbalta, Irenka), venlafaxine (Effexor), venlafaxine XR (Effexor XR), nortriptyline (Aventyl, Pamelor), bupropion (Forfivo XL, Wellbutrin, Wellbutrin SR, Wellbutrin XL), mirtazapine (Remeron, Remeron Soltab), or vortioxetine (Trintellix) * Be willing to undergo PGx testing via single tube blood draw Exclusion: * Do not speak English * Have previously undergone PGx testing * Are unable to provide their own consent to participate in the study * Have been taking the new antidepressant prescription for longer than 4 weeks (prior to screening)

Design outcomes

Primary

MeasureTime frameDescription
Count of Participants Prescribed Antidepressant MedicationBaseline, 3 months, 6 months, and 9 monthsCount of participants who have been prescribed antidepressant medications which are not contraindicated

Secondary

MeasureTime frameDescription
Change in Symptom Severity - Patient Health Questionnaire (PHQ-8)Baseline and 6 monthsChange in PHQ-8 scores. The PHQ-8 is an 8-item participant-report measure for screening for depression and for establishing depression severity. The total score ranges from 0-24, with a higher score indicating greater depression symptom severity.
Change in Symptom Severity - General Anxiety Disorder - 7 (GAD 7)Baseline and 6 monthsThe GAD-7 is a self-administered assessment for general anxiety disorder. The total score for the seven items ranges from 0 to 21. Higher values represent a worse outcome.
Change in Adherence to Refills and Medication Scale (ARMS) ScoresBaseline and 6 monthsChange in medication adherence: The Adherence to Refills and Medication was scored by summing together the 14 items after first reversing the final item to be consistent in direction with the others. Individuals were allowed to have up to 2 missing values present which were imputed with the mean of the remaining answered items, only a handful of individuals answered 13 of the 14 questions resulting in a single item within their scale being imputed across the time periods. The questionnaire has 14 items with each item being recorded on a four-point Likert scale. The total score ranges from 14-56 with the lower score indicating better adherence.

Other

MeasureTime frameDescription
Acceptability of PGx TestingBaseline and 6 monthsAcceptability of PGx testing in primary care among persons taking a target antidepressant and primary care physicians who care for them

Countries

United States

Participant flow

Participants by arm

ArmCount
Delayed Intervention (Control Arm)
Participants in this arm will have PGx test results made available to physicians 3 months after study enrollment PGx test: A laboratory developed genetic test that differentiates common and uncommon alleles in genes that have been previously identified as being involved in either the metabolism or response of drugs used in the treatment of depression and/or anxiety. The results are provided as a report that contains information related to the allele status of the patient's genes, translates this into a phenotype, and relates this phenotype to recommendation classes for drugs.
26
PGx Test
Participants in this arm will have PGx test results made available to physicians as soon available after enrollment. PGx test: A laboratory developed genetic test that differentiates common and uncommon alleles in genes that have been previously identified as being involved in either the metabolism or response of drugs used in the treatment of depression and/or anxiety. The results are provided as a report that contains information related to the allele status of the patient's genes, translates this into a phenotype, and relates this phenotype to recommendation classes for drugs.
25
Physicians
Physicians who practiced at 1 of the 6 UM Family Medicine clinics.
24
Total75

Withdrawals & dropouts

PeriodReasonFG000FG001FG002
Overall StudyFor Physician arm only; those physicians who did not have patients who participated007
Overall StudyLost to Follow-up360
Overall StudyWithdrawal by Subject100

Baseline characteristics

CharacteristicDelayed Intervention (Control Arm)PGx TestTotalPhysicians
Age, Continuous39.2 years
STANDARD_DEVIATION 13.2
42.0 years
STANDARD_DEVIATION 14.6
40.5 years
STANDARD_DEVIATION 13.9
Age of Physicians, Continuous41.83 years
STANDARD_DEVIATION 10.47
41.83 years
STANDARD_DEVIATION 10.47
Education
<4 yrs College
8 Participants11 Participants19 Participants0 Participants
Education
Bachelor's Degree
7 Participants6 Participants13 Participants0 Participants
Education
Graduate
11 Participants8 Participants43 Participants24 Participants
Employment
Employed
19 Participants17 Participants60 Participants24 Participants
Employment
Unemployed
7 Participants8 Participants15 Participants0 Participants
Income
100k+
9 Participants10 Participants19 Participants
Income
<50k
7 Participants8 Participants15 Participants
Income
50k-99k
10 Participants7 Participants17 Participants
Marital Status
Married
11 Participants15 Participants26 Participants
Marital Status
Not Married
15 Participants10 Participants25 Participants
Number of Children
At Least One
12 Participants12 Participants24 Participants
Number of Children
No Children
14 Participants13 Participants27 Participants
Race/Ethnicity, Customized
Asian
1 Participants1 Participants5 Participants3 Participants
Race/Ethnicity, Customized
Black
1 Participants1 Participants2 Participants0 Participants
Race/Ethnicity, Customized
Other
0 Participants2 Participants4 Participants2 Participants
Race/Ethnicity, Customized
Unknown
1 Participants2 Participants3 Participants0 Participants
Race/Ethnicity, Customized
White
23 Participants19 Participants61 Participants19 Participants
Region of Enrollment
United States
26 Participants25 Participants75 Participants24 Participants
Sex/Gender, Customized
Female
13 Participants14 Participants43 Participants16 Participants
Sex/Gender, Customized
Male
13 Participants10 Participants31 Participants8 Participants
Sex/Gender, Customized
Other
0 Participants1 Participants1 Participants0 Participants
Smoking Status
Non-Smoker
25 Participants23 Participants48 Participants
Smoking Status
Smoker
1 Participants2 Participants3 Participants

Adverse events

Event typeEG000
affected / at risk
EG001
affected / at risk
deaths
Total, all-cause mortality
0 / 260 / 25
other
Total, other adverse events
0 / 260 / 25
serious
Total, serious adverse events
0 / 260 / 25

Outcome results

Primary

Count of Participants Prescribed Antidepressant Medication

Count of participants who have been prescribed antidepressant medications which are not contraindicated

Time frame: Baseline, 3 months, 6 months, and 9 months

Population: Per protocol, only control arm patients were to have a 9 month assessment.

ArmMeasureGroupValue (COUNT_OF_PARTICIPANTS)
Delayed Intervention (Control Arm)Count of Participants Prescribed Antidepressant MedicationMonth 66 Participants
Delayed Intervention (Control Arm)Count of Participants Prescribed Antidepressant MedicationMonth 35 Participants
Delayed Intervention (Control Arm)Count of Participants Prescribed Antidepressant MedicationMonth 95 Participants
Delayed Intervention (Control Arm)Count of Participants Prescribed Antidepressant MedicationBaseline5 Participants
PGx TestCount of Participants Prescribed Antidepressant MedicationMonth 38 Participants
PGx TestCount of Participants Prescribed Antidepressant MedicationBaseline8 Participants
PGx TestCount of Participants Prescribed Antidepressant MedicationMonth 68 Participants
Secondary

Change in Adherence to Refills and Medication Scale (ARMS) Scores

Change in medication adherence: The Adherence to Refills and Medication was scored by summing together the 14 items after first reversing the final item to be consistent in direction with the others. Individuals were allowed to have up to 2 missing values present which were imputed with the mean of the remaining answered items, only a handful of individuals answered 13 of the 14 questions resulting in a single item within their scale being imputed across the time periods. The questionnaire has 14 items with each item being recorded on a four-point Likert scale. The total score ranges from 14-56 with the lower score indicating better adherence.

Time frame: Baseline and 6 months

Population: ARMs data is unavailable for 10 participants in the control arm and 8 participants in the PGx Test arm because of missing data at 6 months or loss to follow-up.

ArmMeasureGroupValue (MEAN)Dispersion
Delayed Intervention (Control Arm)Change in Adherence to Refills and Medication Scale (ARMS) Scoresbaseline17.1 score on a scaleStandard Deviation 3.3
Delayed Intervention (Control Arm)Change in Adherence to Refills and Medication Scale (ARMS) Scores6 month17 score on a scaleStandard Deviation 2.5
PGx TestChange in Adherence to Refills and Medication Scale (ARMS) Scoresbaseline17.4 score on a scaleStandard Deviation 3.2
PGx TestChange in Adherence to Refills and Medication Scale (ARMS) Scores6 month16.6 score on a scaleStandard Deviation 3.2
Comparison: baseline to 6 month comparisonp-value: 0.947t-test, 2 sided
Secondary

Change in Symptom Severity - General Anxiety Disorder - 7 (GAD 7)

The GAD-7 is a self-administered assessment for general anxiety disorder. The total score for the seven items ranges from 0 to 21. Higher values represent a worse outcome.

Time frame: Baseline and 6 months

Population: Because GAD-7 data is unavailable for 8 participants in the control arm and 7 participants in the PGx Test arm because of missing data at 6 months or loss to follow-up, the data is presented for those participants who had both data points so comparisons between the two time points are appropriate.

ArmMeasureGroupValue (MEAN)Dispersion
Delayed Intervention (Control Arm)Change in Symptom Severity - General Anxiety Disorder - 7 (GAD 7)baseline9.1 score on a scaleStandard Deviation 6.2
Delayed Intervention (Control Arm)Change in Symptom Severity - General Anxiety Disorder - 7 (GAD 7)Month 66.1 score on a scaleStandard Deviation 5
PGx TestChange in Symptom Severity - General Anxiety Disorder - 7 (GAD 7)baseline6.9 score on a scaleStandard Deviation 5.6
PGx TestChange in Symptom Severity - General Anxiety Disorder - 7 (GAD 7)Month 65.2 score on a scaleStandard Deviation 4.9
Comparison: Baseline p value to six monthp-value: 0.0327t-test, 2 sided
Comparison: baseline to 6 month comparison p valuep-value: 0.2088t-test, 2 sided
Secondary

Change in Symptom Severity - Patient Health Questionnaire (PHQ-8)

Change in PHQ-8 scores. The PHQ-8 is an 8-item participant-report measure for screening for depression and for establishing depression severity. The total score ranges from 0-24, with a higher score indicating greater depression symptom severity.

Time frame: Baseline and 6 months

Population: PHQ-8 data is unavailable for 8 participants in the control arm and 7 participants in the PGx Test arm because of missing data at 6 months or loss to follow-up.

ArmMeasureGroupValue (MEAN)Dispersion
Delayed Intervention (Control Arm)Change in Symptom Severity - Patient Health Questionnaire (PHQ-8)Baseline9.0 score on a scaleStandard Deviation 4.4
Delayed Intervention (Control Arm)Change in Symptom Severity - Patient Health Questionnaire (PHQ-8)6 month7.5 score on a scaleStandard Deviation 4.3
PGx TestChange in Symptom Severity - Patient Health Questionnaire (PHQ-8)Baseline8.6 score on a scaleStandard Deviation 6.1
PGx TestChange in Symptom Severity - Patient Health Questionnaire (PHQ-8)6 month5.8 score on a scaleStandard Deviation 5.4
Comparison: Baseline and 6 month valuesp-value: 0.0115t-test, 2 sided
Comparison: baseline to 6 month comparisonp-value: 0.027t-test, 2 sided
Other Pre-specified

Acceptability of PGx Testing

Acceptability of PGx testing in primary care among persons taking a target antidepressant and primary care physicians who care for them

Time frame: Baseline and 6 months

Source: ClinicalTrials.gov · Data processed: Feb 21, 2026