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Genotype-supported Versus Conventional Proton Pump Inhibitor Dosing

Implementing Genomics in Practice (IGNITE) Proof of Concept Study: CYP2C19 Genotype-supported Versus Conventional Proton Pump Inhibitor Dosing

Status
Completed
Phases
NA
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT02930824
Enrollment
185
Registered
2016-10-12
Start date
2016-12-31
Completion date
2019-07-17
Last updated
2024-05-16

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Gastroesophageal Reflux Disease

Brief summary

Investigators will conduct a comparative effectiveness study of genotype-supported vs. conventional PPI dosing. Adults and children presenting with Gastroesophageal Reflux Disease (GERD) or dyspepsia symptoms and either 1) being initiated on proton pump inhibitor (PPI) therapy or 2) with continued symptoms on current PPI therapy will be recruited from gastroenterology clinics and randomized to a genotype-supported versus conventional PPI therapy management strategy.

Detailed description

The efficacy of proton pump inhibitors (PPIs) is highly dependent on plasma concentrations achieved following drug administration. All PPIs are metabolized in part by the CYP2C19 enzyme, which is encoded by the highly polymorphic CYP2C19 gene. Depending on the CYP2C19 genotype, individuals are classified into different metabolizer phenotypes: poor metabolizers (PM, 2 loss-of-function CYP2C19 alleles); intermediate metabolizers (IM, one loss-of-function allele); normal metabolizers (NM, no loss or gain-of-function alleles); rapid metabolizer (RM; one gain-of-function allele) and ultra-rapid metabolizers (UM, two gain-of function-alleles). Genetic variants in CYP2C19 are known to profoundly influence PPI plasma concentrations and consequently, response to PPI therapy. For example, individuals classified as either RM or UM have lower PPI concentrations compared to NM or loss-of-function (LOF) allele carriers, respond poorly to PPI therapy, and some fail to respond even when the PPI dose is increased. The investigators hypothesize that genotype-supported PPI dosing will lead to better GERD control and improvement in severity of dyspepsia symptoms compared to conventional dosing. The investigators will conduct a comparative effectiveness study of genotype-supported vs. conventional PPI dosing. Patients presenting with GERD or dyspepsia symptoms and either 1) being initiated on PPI therapy or 2) with continued symptoms on current PPI therapy will be recruited from gastroenterology clinics and randomized to a genotype-supported versus conventional PPI therapy management strategy. The investigators will integrate individual CYP2C19 genotype information into dosing decisions for the genotype-supported arm and compare change in symptom control from baseline to the end of the study between study arms. Given that PPI efficacy is related to PPI exposure and to metabolizer phenotype, individualizing treatment using CYP2C19 genotype-supported dosing is expected to improve symptom management. The investigators will also evaluate patient and clinician knowledge and attitudes about pharmacogenetics testing and physician acceptance of genetic information into clinical practice. Finally, the investigators will collect preliminary data on the potential impact of CYP2C19-supported PPI dosing on adverse event rates.

Interventions

All proton pump inhibitors are metabolized in part by the CYP2C19 enzyme, which is encoded by the highly polymorphic CYP2C19 gene. Based on variations within this gene the effectiveness of the drug may be reduced.

Sponsors

Nemours Children's Hospital
CollaboratorOTHER
National Human Genome Research Institute (NHGRI)
CollaboratorNIH
University of Florida
Lead SponsorOTHER

Study design

Allocation
RANDOMIZED
Intervention model
PARALLEL
Primary purpose
SCREENING
Masking
NONE

Eligibility

Sex/Gender
ALL
Age
5 Years to 100 Years
Healthy volunteers
No

Inclusion criteria

Pediatric: Inclusion Criteria: * 5-17 years of age * diagnosed with GERD or any other stomach acid mediated condition for which a PPI treatment is provided * currently under a Proton Pump Inhibitor (PPI) therapy or will start a PPI therapy * Parents/legal guardians and or child must have access to internet and a valid email address

Exclusion criteria

* history of extensive esophageal or gastric surgery * diagnosed with any major chronic illness or conditions that in the opinion of the gastroenterologist that would interfere with participation in the study * history of Phenylketonuria (PKU) and patients with a history of previous adverse effects from PPI treatment or sensitivity to aspartame (NutraSweet, Equal) Adult: Inclusion Criteria: * 18 years of age or older * Gastroesophageal Reflux Disease symptoms * Being initiated on PPI therapy OR continues to have symptoms despite PPI therapy

Design outcomes

Primary

MeasureTime frameDescription
Reflux Disease Questionnaire (RDQ)Change from baseline and 12 weeksThe RDQ was developed to monitor treatment response over time and evaluates 6 symptoms (12 items) covering 3 domains: heartburn, regurgitation, and upper abdominal pain. Each symptom is evaluated using a 6-point Likert scale to assess frequency and severity over the previous week. Each symptom is rated from 1 (did not have) to 6 (severe), and the RDQ mean score is calculated as the mean response to the 12 items. The RDQ mean score thus ranges from 1 to 6 and has been psycho-metrically validated.
Pediatric Sinonasal Symptom Survey (SN-5)Week 4 (or next available results)The Pediatric Sinonasal Symptom Survey (SN-5) is a validated 5-item scale with each item rated on a scale of worsening symptoms from 1 (none of the time) through 7 (all of the time). Items were averaged to yield a single total score ranging from 1 (better outcomes) to 7 (worse outcomes). The total SN-5 scores were compared between the conventional and genotype-guided dosing groups to determine if one group reported worsening symptoms over the other.
Safety Questionnaire (SafetyQ)Over the 12-week period or last date of follow-upOccurrence of adverse events over the 12 weeks was captured by the Safety Questionnaire (SafetyQ), which was to be completed on a weekly basis by the parents. The Safety Questionnaire (SafetyQ) asked about the presence of seven different respiratory symptoms since their last visit; upper respiratory infection, sore throat, strep throat, bronchitis, pneumonia, ear infection, and acute sinusitis. If a symptom was selected as being present since the last visit, the date of onset and patient-reported explanation of the symptom was recorded. The number of participants who reported infections were compared between each group.
Gastroesophageal Reflux Disease (GERD) Assessment of Symptoms in Pediatrics Questionnaire (Gasp-Q)Change in score from baseline to the week 4 ± 1-weekGastroesophageal reflux disease (GERD) Assessment of Symptoms in Pediatrics Questionnaire (Gasp-Q) is a validated patient-reported outcome questionnaire that evaluated proton pump inhibitor therapy efficacy. Gasp-Q inquired about the severity and frequency of belly pain, chest pain, difficulty swallowing, choking, burping, nausea, pain after eating, night pain, and vomiting. If the symptom was present, the patient was asked to score the severity of the symptom ranging from 1 (Not at all severe) to 7 (Most severe). A composite score was then calculated based on the scoring of the 9 symptoms and ranged from 9 to 63.
Pediatric Quality of Life Inventory (PedsQL) Gastrointestinal Symptoms ModuleChange in score from baseline to the week 4 ± 1-weekPediatric Quality of Life Inventory (PedsQL) Gastrointestinal Symptoms Module is a validated patient-reported outcome questionnaire and Likert response scale, to evaluate proton pump inhibitor therapy efficacy. The gastrointestinal problems included in the PedsQL were stomach pain and hurt, stomach upset, food and drink limits, trouble swallowing, heartburn and reflux, gas and bloating, constipation, diarrhea, and worry. Participants were asked to rate the symptoms from 0 (never a problem) to 4 (almost always a problem).

Countries

United States

Participant flow

Participants by arm

ArmCount
Adult Genotype Guided Treatment
For adults randomized to the genotype-supported arm a CYP2C19 genotype will be provided to physicians to assist in dosing. CYP2C19 genotyping: All proton pump inhibitors are metabolized in part by the CYP2C19 enzyme, which is encoded by the highly polymorphic CYP2C19 gene. Based on variations within this gene the effectiveness of the drug may be reduced.
62
Adult Conventional Treatment
For adults randomized to the conventional arm no genotype will be provided to physicians to assist in dosing.
63
Pediatric Genotype Guided Treatment
For children randomized to the genotype-supported arm a CYP2C19 genotype will be provided to physicians to assist in dosing. CYP2C19 genotyping: All proton pump inhibitors are metabolized in part by the CYP2C19 enzyme, which is encoded by the highly polymorphic CYP2C19 gene. Based on variations within this gene the effectiveness of the drug may be reduced.
30
Pediatric Conventional Treatment
For children randomized to the conventional arm no genotype will be provided to physicians to assist in dosing.
30
Total185

Baseline characteristics

CharacteristicAdult Genotype Guided TreatmentTotalPediatric Conventional TreatmentPediatric Genotype Guided TreatmentAdult Conventional Treatment
Age, Continuous53.8 years
STANDARD_DEVIATION 15.7
39.4 years
STANDARD_DEVIATION 23.1
12.5 years
STANDARD_DEVIATION 3.6
12 years
STANDARD_DEVIATION 3.7
50.5 years
STANDARD_DEVIATION 16.3
Ethnicity (NIH/OMB)
Hispanic or Latino
7 Participants25 Participants6 Participants8 Participants4 Participants
Ethnicity (NIH/OMB)
Not Hispanic or Latino
48 Participants149 Participants24 Participants22 Participants55 Participants
Ethnicity (NIH/OMB)
Unknown or Not Reported
7 Participants11 Participants0 Participants0 Participants4 Participants
Race (NIH/OMB)
American Indian or Alaska Native
0 Participants1 Participants0 Participants0 Participants1 Participants
Race (NIH/OMB)
Asian
1 Participants1 Participants0 Participants0 Participants0 Participants
Race (NIH/OMB)
Black or African American
12 Participants23 Participants1 Participants3 Participants7 Participants
Race (NIH/OMB)
More than one race
3 Participants15 Participants2 Participants6 Participants4 Participants
Race (NIH/OMB)
Native Hawaiian or Other Pacific Islander
0 Participants1 Participants0 Participants1 Participants0 Participants
Race (NIH/OMB)
Unknown or Not Reported
0 Participants0 Participants0 Participants0 Participants0 Participants
Race (NIH/OMB)
White
46 Participants144 Participants27 Participants20 Participants51 Participants
Region of Enrollment
United States
62 participants185 participants30 participants30 participants63 participants
Sex: Female, Male
Female
43 Participants120 Participants17 Participants17 Participants43 Participants
Sex: Female, Male
Male
19 Participants65 Participants13 Participants13 Participants20 Participants

Adverse events

Event typeEG000
affected / at risk
EG001
affected / at risk
EG002
affected / at risk
EG003
affected / at risk
deaths
Total, all-cause mortality
0 / 00 / 00 / 00 / 0
other
Total, other adverse events
0 / 00 / 00 / 00 / 0
serious
Total, serious adverse events
0 / 00 / 00 / 00 / 0

Outcome results

Primary

Gastroesophageal Reflux Disease (GERD) Assessment of Symptoms in Pediatrics Questionnaire (Gasp-Q)

Gastroesophageal reflux disease (GERD) Assessment of Symptoms in Pediatrics Questionnaire (Gasp-Q) is a validated patient-reported outcome questionnaire that evaluated proton pump inhibitor therapy efficacy. Gasp-Q inquired about the severity and frequency of belly pain, chest pain, difficulty swallowing, choking, burping, nausea, pain after eating, night pain, and vomiting. If the symptom was present, the patient was asked to score the severity of the symptom ranging from 1 (Not at all severe) to 7 (Most severe). A composite score was then calculated based on the scoring of the 9 symptoms and ranged from 9 to 63.

Time frame: Change in score from baseline to the week 4 ± 1-week

Population: Children aged 5-17 years old with gastric-acid-related conditions and a completed Gasp-Q questionnaire at baseline and week 4 ± 1-week

ArmMeasureValue (MEAN)
Pediatric Genotype Guided TreatmentGastroesophageal Reflux Disease (GERD) Assessment of Symptoms in Pediatrics Questionnaire (Gasp-Q)-24.0 median (IQR) composite score
Pediatric Conventional TreatmentGastroesophageal Reflux Disease (GERD) Assessment of Symptoms in Pediatrics Questionnaire (Gasp-Q)-26.0 median (IQR) composite score
Comparison: If a participant did not complete a follow-up questionnaire during their third to fifth week of proton pump inhibitor therapy, their questionnaire results were excluded from the analyses.p-value: 0.97Wilcoxon (Mann-Whitney)
Primary

Pediatric Quality of Life Inventory (PedsQL) Gastrointestinal Symptoms Module

Pediatric Quality of Life Inventory (PedsQL) Gastrointestinal Symptoms Module is a validated patient-reported outcome questionnaire and Likert response scale, to evaluate proton pump inhibitor therapy efficacy. The gastrointestinal problems included in the PedsQL were stomach pain and hurt, stomach upset, food and drink limits, trouble swallowing, heartburn and reflux, gas and bloating, constipation, diarrhea, and worry. Participants were asked to rate the symptoms from 0 (never a problem) to 4 (almost always a problem).

Time frame: Change in score from baseline to the week 4 ± 1-week

Population: Children aged 5-17 years old with gastric-acid-related conditions with a completed PedsQL questionnaire at baseline and week 4 ± 1-week

ArmMeasureValue (MEAN)
Pediatric Genotype Guided TreatmentPediatric Quality of Life Inventory (PedsQL) Gastrointestinal Symptoms Module8.2 score on a scale
Pediatric Conventional TreatmentPediatric Quality of Life Inventory (PedsQL) Gastrointestinal Symptoms Module5.4 score on a scale
Comparison: If a participant did not complete a follow-up questionnaire during their third to fifth week of proton pump inhibitor therapy, their questionnaire results were excluded from the analyses.p-value: 0.83Wilcoxon (Mann-Whitney)
Primary

Pediatric Sinonasal Symptom Survey (SN-5)

The Pediatric Sinonasal Symptom Survey (SN-5) is a validated 5-item scale with each item rated on a scale of worsening symptoms from 1 (none of the time) through 7 (all of the time). Items were averaged to yield a single total score ranging from 1 (better outcomes) to 7 (worse outcomes). The total SN-5 scores were compared between the conventional and genotype-guided dosing groups to determine if one group reported worsening symptoms over the other.

Time frame: Week 4 (or next available results)

Population: Children aged 5-17 years old with gastric-acid-related conditions and a completed SN-5 questionnaire at week 4 (or next available results)

ArmMeasureValue (MEAN)
Pediatric Genotype Guided TreatmentPediatric Sinonasal Symptom Survey (SN-5)1.8 score on a scale
Pediatric Conventional TreatmentPediatric Sinonasal Symptom Survey (SN-5)2.6 score on a scale
p-value: 0.031Wilcoxon (Mann-Whitney)
Primary

Reflux Disease Questionnaire (RDQ)

The RDQ was developed to monitor treatment response over time and evaluates 6 symptoms (12 items) covering 3 domains: heartburn, regurgitation, and upper abdominal pain. Each symptom is evaluated using a 6-point Likert scale to assess frequency and severity over the previous week. Each symptom is rated from 1 (did not have) to 6 (severe), and the RDQ mean score is calculated as the mean response to the 12 items. The RDQ mean score thus ranges from 1 to 6 and has been psycho-metrically validated.

Time frame: Change from baseline and 12 weeks

Population: Adult patients enrolled that have a CYP2C19 Rapid or Ultra-rapid metabolizer result.

ArmMeasureValue (MEAN)Dispersion
Adult Genotype Guided TreatmentReflux Disease Questionnaire (RDQ)-0.387 score on a scaleStandard Deviation 1.2
Adult Conventional TreatmentReflux Disease Questionnaire (RDQ)-0.296 score on a scaleStandard Deviation 0.58
Comparison: We will test the hypothesis that CYP2C19 rapid metabolizers or ultra rapid metabolizers (1 or 2 gain-of-function alleles) in the genotype-supported arm have better gastroesophageal reflux disease and symptom control than CYP2C19 rapid metabolizers or ultra rapid metabolizers in the conventional treatment group because they will have their dose increased based on their genotype.p-value: 0.78t-test, 2 sided
Primary

Safety Questionnaire (SafetyQ)

Occurrence of adverse events over the 12 weeks was captured by the Safety Questionnaire (SafetyQ), which was to be completed on a weekly basis by the parents. The Safety Questionnaire (SafetyQ) asked about the presence of seven different respiratory symptoms since their last visit; upper respiratory infection, sore throat, strep throat, bronchitis, pneumonia, ear infection, and acute sinusitis. If a symptom was selected as being present since the last visit, the date of onset and patient-reported explanation of the symptom was recorded. The number of participants who reported infections were compared between each group.

Time frame: Over the 12-week period or last date of follow-up

Population: Children aged 5-17 years old with gastric-acid-related conditions with completed SafetyQ assessment over the 12-week period or last date of follow-up

ArmMeasureValue (NUMBER)
Pediatric Genotype Guided TreatmentSafety Questionnaire (SafetyQ)20 % of participants reporting infections
Pediatric Conventional TreatmentSafety Questionnaire (SafetyQ)44 % of participants reporting infections
p-value: 0.0795% CI: [0.9, 6.3]Log Rank

Source: ClinicalTrials.gov · Data processed: Feb 4, 2026