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Resistance Testing to Improve Management of Virologic Failure in Sub-Saharan Africa

Resistance Testing Versus Adherence Support for Management of Patients With Virologic Failure on First-Line Antiretroviral Therapy in Sub-Saharan Africa

Status
Completed
Phases
NA
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT02787499
Acronym
REVAMP
Enrollment
840
Registered
2016-06-01
Start date
2016-12-08
Completion date
2020-09-08
Last updated
2023-03-21

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

AIDS, HIV

Keywords

Drug resistance, Standard of care, sub-saharan africa, antiretroviral therapy, diagnostics, implementation

Brief summary

The study design is an open-label, randomized controlled trial. The study will be conducted at study sites in Uganda and South Africa. The study population will include HIV-infected patients on first-line antiretroviral therapy with a recent viral load \>1,000 copies/milliliter (or dried blood spot viral load \>1,000 copies/milliliter). Eligible participants will be randomized to the WHO-based standard of care for management of virologic failure or immediate resistance testing to guide ART regimen decisions. The primary outcome of interest will be viral suppression (\<200 copies/mL) at 9 months after study enrollment, and will be assessed using an intention to treat analysis, where missing or absent results will be considered failures. Secondary outcomes of interest will be viral suppression below the limit of assay detection, viral suppression on continuation of first-line (non-nucleoside reverse transcriptase inhibitor \[NNRTI\]-based) therapy, drug resistance at study conclusion, and mortality, among others. The overarching goal of this study is to determine whether addition of routine resistance testing, to guide management of virologic failure and sustain the successful completion of the HIV continuum of care, improves clinical outcomes and reduces costs for patients with virologic failure on first-line therapy in sub-Saharan Africa.

Detailed description

STUDY PROCEDURES FOR PARTICIPANTS RANDOMIZED TO STANDARD OF CARE ARM A. Visit 1-SOC: Baseline Visit for Standard of Care Participants At Study Visit 1, participants randomized to the SOC will complete the baseline questionnaire to collect sociodemographic, HIV clinical and treatment history, self-reported ART medication adherence, quality of life, and resource allocation data. Study staff will review participant records to collect data on clinic initiation start date, opportunistic infection history, ART initiation date, ART regimen history, CD4 count and viral load result histories. A single 10cc blood specimen will be drawn for storage for future testing for viral load, resistance testing, and drug therapeutic monitoring. Upon completion of the baseline questionnaire, participants will be referred to clinic counselors who will conduct adherence support counseling as per standard clinical procedures. A follow-up study visit will be scheduled 3 months from the baseline date (or at 1 month for pregnant participants only). Any interim clinical visits that are indicated by the clinic staff will be maintained. The participant will be instructed to continue their current ART regimen until at least the next clinical visit. B. Visit 2A-SOC: Repeat Viral Load Testing Visit At Study Visit 2A, participants in the SOC arm will undergo blood collection for viral load testing in keeping with WHO guidelines. An additional tube 10cc tube will be drawn for storage for future analyses. A study questionnaire will be administered to assess self-reported ART medication adherence. No other procedures are scheduled at this visit. Participants will be notified that study staff will contact them as soon as their results are available, to request return to clinic for further management. The participant will be instructed to continue their current ART regimen until at least the next clinical visit. As soon as the viral load result is available, study participants will be contacted and requested to return to clinic for review. If the viral load is indeterminate or not completed for any reason, study staff will request that the participant return for a repeat viral load test. C. Visit 2B-SOC: Viral Load Testing Results and Therapeutic Management At Study Visit 2B, study clinicians will review the viral load result. Participants with a viral load ≤ 1,000 copies/mL will continue their first-line (NNRTI-based) ART regimen without change. Participants with a viral load \>1,000 copies/mL will change ART regimen to a second-line, protease inhibitor (PI)-based or, if available, integrase inhibitor (II)-based therapy. Clinicians will also be encouraged to change the nucleos(t)ide reverse transcriptase component of the regimen (for example, changing from zidovudine to tenofovir), based on prior exposures, as well as WHO and national guidelines. All regimen decisions will be made by the study clinician, in cooperation with clinic staff at the study sites. In the case of complex management issues, the site principal investigators (Dr. Bosco Bwana in Mbarara and Dr. Yunus Moosa in Durban) will be contacted to offer input. At the conclusion of Visit 2B-SOC, participants in the SOC arm will be scheduled for a final study visit approximately 6 months later. A final visit at 6 months is chosen to allow ample time for drug suppression for participants with detectable viral load at this 3-month visit. Non-study clinical visits for routine clinical care will continue in the interim as determined and scheduled by clinic staff. D. Visit 3: Outcome Assessment At Study Visit 3, participants will undergo repeat blood testing for plasma viral load and, if the viral load is detectable, reflex resistance testing will be performed. An additional 10cc tube will be drawn for storage for future testing. A study questionnaire will be administered to assess resource allocation, ART medication adherence, and quality of life. Study staff will review participant records to update interim CD4 count, viral load, and ART regimen data. Results of viral load and resistance testing from this visit will be immediately made available to clinic staff for further patient management. At the conclusion of Visit 3, study procedures will be complete. E. Missing and Late Appointments If study participants do not return for study visits, study staff will call them to encourage return to clinic for continuation or completion of procedures. For participants who do not return within 7 days of a scheduled visit and unreachable by phone, a study staff member will attempt to track them at home using a standardized lost-to-follow-up form and procedures developed and used successfully both for program and clinical care in Mbarara for over 10 years. If participants are located, study staff will encourage them to return to clinic to complete procedures and/or conduct the blood draw and questionnaire in in the field if the participant agrees. STUDY PROCEDURES FOR PARTICIPANTS RANDOMIZED TO RESISTANCE TESTING ARM A. Visit 1-RT: Baseline Visit for Resistance Testing Participants At Study Visit 1, participants randomized to the RT will complete the baseline questionnaire to collect sociodemographic, HIV clinical and treatment history, self-reported ART medication adherence, quality of life, and resource allocation data. Study staff will review participant records to collect data on clinic initiation start date, opportunistic infection history, ART initiation date, ART regimen history, CD4 count and viral load result histories. Upon completion of the baseline questionnaire, participants will undergo phlebotomy for resistance testing. Participants will be notified that study staff will contact them as soon as their results are available, to request return to clinic for further management. Upon completion of the study procedures, participants will be referred to clinic counselors who will conduct adherence support counseling as per standard clinical procedures. The participant will be instructed to continue their current ART regimen until at least the next clinical visit. As soon as the resistance test result is available, study participants will be contacted by phone and requested to return to clinic for review. B. Visit 2-RT: Resistance Testing Results and Therapeutic Management At Study Visit 2-RT, study clinicians will review the resistance testing result. A study HIV-1 RNA drug resistance interpretation guide will be used to help guide decision-making. Participants without significant drug resistance, as determined by the study clinician in consultation with the resistance interpretation guide will continue their first-line (NNRTI-based) ART regimen without change. Participants with therapeutic drug resistance will change ART regimen to a second-line, protease inhibitor (PI)-based or, if available, integrase inhibitor (II)-based therapy. Clinicians will also be encouraged to change the nucleos(t)ide reverse transcriptase component of the regimen (for example, changing from zidovudine to tenofovir). All regimen decisions will be made by the study clinician, in cooperation with clinic staff at the study sites. In the case of complex management issues, the site principal investigators (Dr. Bosco Bwana in Mbarara and Dr. Yunus Moosa in Durban) will be contacted to offer input. At the conclusion of Visit 2-RT, participants will be scheduled for a final study visit approximately 9 months from the time of enrollment. A final visit 9 months later is chosen to match the approximate 9-month study duration for participants in the SOC arm. Non-study clinical visits for routine clinical care will continue in the interim as determined and scheduled by clinic staff. C. Visit 3: Outcome Assessment At Study Visit 3, participants will undergo repeat blood testing for plasma viral load and, if the viral load is detectable, reflex resistance testing will be performed. An additional 10cc tube will be drawn for storage for future testing for viral load, resistance testing, and drug therapeutic monitoring. A study questionnaire will be administered to assess resource allocation and quality of life. Study staff will review participant records to update interim CD4 count, viral load, and ART regimen data. Results of viral load and resistance testing from this visit will be immediately made available to clinic staff for further patient management. At the conclusion of Visit 3, study procedures will be complete.

Interventions

PROCEDUREHIV-1 RNA Resistance Testing

Perform drug resistance on enrollment to guide management of virologic failure

Sponsors

Mbarara University of Science and Technology
CollaboratorOTHER
University of KwaZulu
CollaboratorOTHER
Emory University
CollaboratorOTHER
University of Rochester
CollaboratorOTHER
National Institute of Allergy and Infectious Diseases (NIAID)
CollaboratorNIH
Massachusetts General Hospital
Lead SponsorOTHER

Study design

Allocation
RANDOMIZED
Intervention model
PARALLEL
Primary purpose
DIAGNOSTIC
Masking
NONE

Eligibility

Sex/Gender
ALL
Age
18 Years to No maximum
Healthy volunteers
No

Inclusion criteria

* In care at a public HIV clinic within a PEPFAR-focus sub-Saharan African country (South Africa or Uganda) and living within 100 kilometers of the clinic * Age ≥ 18 years at the time of enrollment * Currently prescribed first-line (non-nucleoside reverse transcriptase inhibitor \[NNRTI\]-based) ART for at least 5 months. Switches within first line regimens, including NNRTI and nucleos(t)ide backbone changes are allowed. * Detectable plasma viral load \> 1,000 copies/mL or dried blood spot viral load \> 1,000 copies/mL within 90 days of enrollment

Exclusion criteria

* Known prior drug resistance * Prior exposure to PI-based ART * Current clinical indication to start PI-based ART * Not planning to remain in the clinic catchment area for the next nine months

Design outcomes

Primary

MeasureTime frameDescription
Number and Percentage of Patients Achieving Virologic Resuppression9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)Number and percentage of participants achieving virologic suppression. Virologic resuppression defined as viral load \< 200 copies/mL

Secondary

MeasureTime frameDescription
Number and Percentage of Patients With an Undetectable Viral Load on First-line (NNRTI-based) Therapy at Study Conclusion9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)The number and percentage of patients with an undetectable viral load on first-line (NNRTI-based) therapy at study conclusion. Viral load \< 200 copies/mL
Number and Percentage of Patients With International AIDS Society-defined Drug Resistance Mutations to Their Current Regimen.9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)Proportion of patients with International AIDS Society-defined drug resistance mutations to their current regimen. As part of this analysis, we will also evaluate for minority drug resistance
Total Patient Care Costs, Including Diagnostic Testing and ART Costs for the Study Duration9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)Total patient care costs, including diagnostic testing and ART costs for the study duration. These data are reported as median cost and IQR per person by arm.
Number and Percentage of Patients With an Undetectable Viral Load (Below Limit of Detection) at Study Conclusion9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)Number and percentage of patients with an undetectable viral load (below limit of detection) at study conclusion. Viral load \< 200 copies/mL
Number and Percentage of Participants Survived Through 9-month Study Period9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)Odds of 9-month survival. Number and percentage of participants who survived through the 9-month (then 15-month) study period.
Change in Health-related Quality of Life From Baseline to 9 Months9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)Change in health-related quality of life from baseline to 9 months. The scale used is Health-related Quality of Life (HRQoL), where the minimum score is 0 = 'death' and the maximum is 1 = 'perfect' health. We are reporting mean change in HRQoL, so a larger positive value indicates a larger improvement of HRQoL. Two time points used in the calculation were the HRQoL score at the baseline visit and at the final visit at 9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic).
Number and Percentage of Patients Retained in HIV Clinical Care at Study Completion9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)The number and percentage of patients retained in HIV clinical care at study completion

Countries

South Africa, Uganda

Participant flow

Participants by arm

ArmCount
Standard of Care
Follows the 2013 World Health Organization (WHO) HIV treatment guidelines. Study participants will receive adherence support and return for a repeat viral load test in 3 months (or in 1 month for pregnant participants). Treatment failure will be defined by two consecutive viral load measurements greater than 1,000 copies/mL. Participants who meet this criteria will be switched to second-line therapy. Those with a viral load \<1,000 copies/mL at repeat testing will be retained on first-line therapy.
423
HIV-1 RNA Resistance Testing
Participants will receive HIV-1 RNA drug resistance testing at study enrollment. ART treatment regimen decisions will be determined based on the results of resistance testing. HIV-1 RNA Resistance Testing: Perform drug resistance on enrollment to guide management of virologic failure
417
Total840

Baseline characteristics

CharacteristicHIV-1 RNA Resistance TestingTotalStandard of Care
Age, Categorical
<=18 years
2 Participants6 Participants4 Participants
Age, Categorical
>=65 years
3 Participants7 Participants4 Participants
Age, Categorical
Between 18 and 65 years
412 Participants827 Participants415 Participants
Age, Continuous37 years37 years37 years
ART regimen
AZT-3TC-NVP
58 Participants118 Participants60 Participants
ART regimen
Other
64 Participants116 Participants52 Participants
ART regimen
TDF-3(F)TC-EFV
295 Participants606 Participants311 Participants
Country
South Africa
207 Participants420 Participants213 Participants
Country
Uganda
210 Participants420 Participants210 Participants
Ethnicity (NIH/OMB)
Hispanic or Latino
0 Participants0 Participants0 Participants
Ethnicity (NIH/OMB)
Not Hispanic or Latino
417 Participants840 Participants423 Participants
Ethnicity (NIH/OMB)
Unknown or Not Reported
0 Participants0 Participants0 Participants
Median Antiretroviral therapy (ART) duration3.0 years3.2 years3.5 years
Median CD4 count0.259 x 10^9 cells/L0.281 x 10^9 cells/L0.303 x 10^9 cells/L
Pregnancy
Not pregnant at enrollment
411 Participants827 Participants416 Participants
Pregnancy
Pregnant at enrollment
6 Participants13 Participants7 Participants
Region of Enrollment
South Africa
207 participants420 participants213 participants
Region of Enrollment
Uganda
210 participants420 participants210 participants
Self-reported treatment adherence at enrollment
<100% in prior 30 d
295 Participants592 Participants297 Participants
Self-reported treatment adherence at enrollment
100% in prior 30 d
122 Participants248 Participants126 Participants
Sex: Female, Male
Female
209 Participants430 Participants221 Participants
Sex: Female, Male
Male
208 Participants410 Participants202 Participants

Adverse events

Event typeEG000
affected / at risk
EG001
affected / at risk
deaths
Total, all-cause mortality
8 / 42314 / 417
other
Total, other adverse events
0 / 4230 / 417
serious
Total, serious adverse events
0 / 4230 / 417

Outcome results

Primary

Number and Percentage of Patients Achieving Virologic Resuppression

Number and percentage of participants achieving virologic suppression. Virologic resuppression defined as viral load \< 200 copies/mL

Time frame: 9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
Standard of CareNumber and Percentage of Patients Achieving Virologic Resuppression256 Participants
HIV-1 RNA Resistance TestingNumber and Percentage of Patients Achieving Virologic Resuppression263 Participants
Secondary

Change in Health-related Quality of Life From Baseline to 9 Months

Change in health-related quality of life from baseline to 9 months. The scale used is Health-related Quality of Life (HRQoL), where the minimum score is 0 = 'death' and the maximum is 1 = 'perfect' health. We are reporting mean change in HRQoL, so a larger positive value indicates a larger improvement of HRQoL. Two time points used in the calculation were the HRQoL score at the baseline visit and at the final visit at 9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic).

Time frame: 9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)

Population: This analysis was completed for participants with complete utility data at visit 3 (at 9 months or 15 months due to the pandemic). There was missing HRQoL data for 24 participants in the Standard of Care arm and 19 participants in the Resistance Testing arm at visit 3. Therefore, the numbers of participants for this outcome are different from other outcome measures.

ArmMeasureValue (MEAN)
Standard of CareChange in Health-related Quality of Life From Baseline to 9 Months0.064 score on a scale
HIV-1 RNA Resistance TestingChange in Health-related Quality of Life From Baseline to 9 Months0.078 score on a scale
Secondary

Number and Percentage of Participants Survived Through 9-month Study Period

Odds of 9-month survival. Number and percentage of participants who survived through the 9-month (then 15-month) study period.

Time frame: 9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
Standard of CareNumber and Percentage of Participants Survived Through 9-month Study Period415 Participants
HIV-1 RNA Resistance TestingNumber and Percentage of Participants Survived Through 9-month Study Period403 Participants
Secondary

Number and Percentage of Patients Retained in HIV Clinical Care at Study Completion

The number and percentage of patients retained in HIV clinical care at study completion

Time frame: 9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
Standard of CareNumber and Percentage of Patients Retained in HIV Clinical Care at Study Completion403 Participants
HIV-1 RNA Resistance TestingNumber and Percentage of Patients Retained in HIV Clinical Care at Study Completion394 Participants
Secondary

Number and Percentage of Patients With an Undetectable Viral Load (Below Limit of Detection) at Study Conclusion

Number and percentage of patients with an undetectable viral load (below limit of detection) at study conclusion. Viral load \< 200 copies/mL

Time frame: 9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
Standard of CareNumber and Percentage of Patients With an Undetectable Viral Load (Below Limit of Detection) at Study Conclusion193 Participants
HIV-1 RNA Resistance TestingNumber and Percentage of Patients With an Undetectable Viral Load (Below Limit of Detection) at Study Conclusion202 Participants
Secondary

Number and Percentage of Patients With an Undetectable Viral Load on First-line (NNRTI-based) Therapy at Study Conclusion

The number and percentage of patients with an undetectable viral load on first-line (NNRTI-based) therapy at study conclusion. Viral load \< 200 copies/mL

Time frame: 9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
Standard of CareNumber and Percentage of Patients With an Undetectable Viral Load on First-line (NNRTI-based) Therapy at Study Conclusion81 Participants
HIV-1 RNA Resistance TestingNumber and Percentage of Patients With an Undetectable Viral Load on First-line (NNRTI-based) Therapy at Study Conclusion62 Participants
Secondary

Number and Percentage of Patients With International AIDS Society-defined Drug Resistance Mutations to Their Current Regimen.

Proportion of patients with International AIDS Society-defined drug resistance mutations to their current regimen. As part of this analysis, we will also evaluate for minority drug resistance

Time frame: 9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)

ArmMeasureValue (COUNT_OF_PARTICIPANTS)
Standard of CareNumber and Percentage of Patients With International AIDS Society-defined Drug Resistance Mutations to Their Current Regimen.25 Participants
HIV-1 RNA Resistance TestingNumber and Percentage of Patients With International AIDS Society-defined Drug Resistance Mutations to Their Current Regimen.34 Participants
Secondary

Total Patient Care Costs, Including Diagnostic Testing and ART Costs for the Study Duration

Total patient care costs, including diagnostic testing and ART costs for the study duration. These data are reported as median cost and IQR per person by arm.

Time frame: 9 months (end point extended up to 15 months for participants affected by the COVID-19 epidemic)

ArmMeasureValue (MEDIAN)
Standard of CareTotal Patient Care Costs, Including Diagnostic Testing and ART Costs for the Study Duration227 dollars
HIV-1 RNA Resistance TestingTotal Patient Care Costs, Including Diagnostic Testing and ART Costs for the Study Duration400 dollars

Source: ClinicalTrials.gov · Data processed: Feb 20, 2026