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Beneficial Bacteria Treatment for Autism

Treating Gastrointestinal Problems in Children With Autism Using Beneficial Bacteria Treatment (BBT)

Status
Completed
Phases
Phase 1Phase 2
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT02504554
Acronym
BBT
Enrollment
18
Registered
2015-07-22
Start date
2014-07-31
Completion date
2016-04-30
Last updated
2025-09-12

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Gastrointestinal Problems, Autism Spectrum Disorders

Keywords

children

Brief summary

This is an open-label clinical trial to investigate a combination therapy for treating gastrointestinal problems in children with autism spectrum disorders. The combination therapy includes beneficial bacteria.

Detailed description

This is an open-label clinical trial to evaluate the safety, tolerability, and feasibility of a combination therapy to treat gastrointestinal problems in children with autism spectrum disorders. It involves a combination therapy including beneficial bacteria.

Interventions

an antibiotic

a bowel cleanse

a stomach acid suppressan

BIOLOGICALhuman fecal material; processed, frozen administered orally

human fecal material; processed, frozen, administered orally

BIOLOGICALhuman fecal material; processed, frozen; administered orally and rectally

human fecal material; processed, frozen; administered orally and rectally

Sponsors

Northern Arizona University
CollaboratorOTHER
University of Arizona
CollaboratorOTHER
University of Minnesota
CollaboratorOTHER
Arizona State University
Lead SponsorOTHER

Study design

Allocation
NON_RANDOMIZED
Intervention model
PARALLEL
Primary purpose
TREATMENT
Masking
NONE

Eligibility

Sex/Gender
ALL
Age
7 Years to 17 Years
Healthy volunteers
No

Inclusion criteria

1. Children ages 7-17 years 2. Diagnosis of autism per Autism Diagnostic Interview-Revised (ADI-R) 3. Moderate or Severe GI problems ( on the GSRS, a single score of 4 (severe) on any item, or a score of 3 (moderate) on two items, or a score of 2 (mild) or more on any 4 items 4. No changes in medications, supplements, diet, therapies, or education in last 3 months, and no intention to change them during clinical trial 5. General good physical health aside from gastrointestinal problems 6. Cognitive Ability to Provide Informed Assent

Exclusion criteria

1. Antibiotics in last 6 months 2. Probiotics in last 3 months 3. Single-gene disorder (Fragile X, etc.) 4. Major brain malformation 5. Tube feeding 6. Severe gastrointestinal problems that require immediate treatment (life-threatening) 7. Ulcerative Colitis, Crohn's Disease, diagnosed Celiac Disease, Eosinophilic Gastroenteritis, or similar conditions 8. Severely underweight/malnourished 9. Recent or scheduled surgeries 10. Current participation in other clinical trials

Design outcomes

Primary

MeasureTime frameDescription
Gastrointestinal Symptom Responsiveness Scale (GSRS)Baseline and 10 weeks (end of treatment)The GSRS is a measure of gastrointestinal symptoms. It includes 15 questions, rated on a Likert scale of 1-7, from no symptoms to severe symptoms, respectively (i.e., higher is worse). We report an average score for all 15 questions, so the possible range for the average score is also 1-7.

Secondary

MeasureTime frameDescription
Blood Safety Markers (Assessment of Blood Chemistry Panel and Complete Blood Count)Baseline and 10 weeks (end of treatment)Number of participants who had a clinically significant change in their blood safety markers (comprehensive metabolic panel including kidney/liver function and complete blood count with differential)
Childhood Autism Rating Scale (CARS)Baseline and 10 weeks (end of treatment)The CARS is an assessment of 15 autism-related symptoms. Each item is scored on a scale of 1 (no symptoms) to 4 (severe symptoms), and the scores for each symptom are summed to obtain a total score. So, the possible scores range from 15 to 60, with a higher score indicating greater severity.
Social Responsiveness Scale (SRS)Baseline and 10 weeks (end of treatment)The SRS is an assessment of social skills based on 65 items, where each item is scored on a range of 0 (no symptoms) to 3 (severe symptoms). The total score is a sum of the individual scores, so the total possible range is from 0 to 195, with a higher score indicating greater severity of symptoms.
Parent Global Impressions-Revised (PGI-R)Baseline and 10 weeks (end of treatment)The PGI-R is a rating of change of 18 autism symptoms compared to baseline, with each symptom rated on a Likert scale from -3 (much worse) to zero (no change) to +3 (much better). We report the average change of the 18 symptoms, so the possible range is from -3 to +3.
Vineland Adaptive Behavior Scale (VABS)baseline and 18 weeks (8 weeks after treatment stopped)The VABS is an assessment of adaptive behaviors, and we analyzed it to determine the developmental age of the participants, with possible scores ranging from 0 years to 21 years.
Daily Stool Record (DSR)Baseline and 10 weeks (end of treatment)The DSR is a record of the type of stool that a participant had each day, using the Bristol Stool Form which ranges from 1 (very hard) to 7 (liquid). We then analyzed the data as % days of abnormal stools over a 14 day period, where an abnormal stool is defined as an unusually hard stool (types 1-2), unusually soft stool (types 6-7), or no stool that day. So, the possible range of % days of abnormal stools is from 0% to 100%, with a higher score indicating a more severe problem.
Short Sensory Profilebaseline and 10 weeksThe Short Sensory Profile is an assessment of sensory problems. However, the data on this scale was not collected due to administrative error.

Participant flow

Participants by arm

ArmCount
Oral Group
This group will receive all treatments orally. The treatments include a combination of Vancomycin, MoviPrep, Prilosec, and human fecal material; processed, frozen. oral Vancomycin: an antibiotic MoviPrep: a bowel cleanse Prilosec: a stomach acid suppressan human fecal material; processed, frozen administered orally: human fecal material; processed, frozen, administered orally
12
Rectal Group
This group will receive some treatments rectally and some orally. The treatments include a combination of Vancomycin, MoviPrep, Prilosec, and human fecal material; processed, frozen. oral Vancomycin: an antibiotic MoviPrep: a bowel cleanse Prilosec: a stomach acid suppressan human fecal material; processed, frozen; administered orally and rectally: human fecal material; processed, frozen; administered orally and rectally
6
Total18

Baseline characteristics

CharacteristicOral GroupRectal GroupTotal
Age, Categorical
<=18 years
12 Participants6 Participants18 Participants
Age, Categorical
>=65 years
0 Participants0 Participants0 Participants
Age, Categorical
Between 18 and 65 years
0 Participants0 Participants0 Participants
Region of Enrollment
United States
12 participants6 participants18 participants
Sex: Female, Male
Female
1 Participants1 Participants2 Participants
Sex: Female, Male
Male
11 Participants5 Participants16 Participants

Adverse events

Event typeEG000
affected / at risk
deaths
Total, all-cause mortality
0 / 18
other
Total, other adverse events
12 / 18
serious
Total, serious adverse events
0 / 18

Outcome results

Primary

Gastrointestinal Symptom Responsiveness Scale (GSRS)

The GSRS is a measure of gastrointestinal symptoms. It includes 15 questions, rated on a Likert scale of 1-7, from no symptoms to severe symptoms, respectively (i.e., higher is worse). We report an average score for all 15 questions, so the possible range for the average score is also 1-7.

Time frame: Baseline and 10 weeks (end of treatment)

Population: We report the data on all participants, regardless of how the initial dose of bacteria was administered (oral or rectal).

ArmMeasureGroupValue (MEAN)Dispersion
Combined GroupGastrointestinal Symptom Responsiveness Scale (GSRS)Baseline2.74 units on a scaleStandard Deviation 0.57
Combined GroupGastrointestinal Symptom Responsiveness Scale (GSRS)10 weeks1.31 units on a scaleStandard Deviation 0.45
Comparison: Wilcoxon signed rank analysis of symptoms at 10 weeks (end of treatment) vs. baselinep-value: <0.001Wilcoxon (Mann-Whitney)
Secondary

Blood Safety Markers (Assessment of Blood Chemistry Panel and Complete Blood Count)

Number of participants who had a clinically significant change in their blood safety markers (comprehensive metabolic panel including kidney/liver function and complete blood count with differential)

Time frame: Baseline and 10 weeks (end of treatment)

Population: We report the data on 18 participants, regardless of how the initial dose of bacteria was administered.

ArmMeasureValue (NUMBER)
Combined GroupBlood Safety Markers (Assessment of Blood Chemistry Panel and Complete Blood Count)0 participants
Secondary

Childhood Autism Rating Scale (CARS)

The CARS is an assessment of 15 autism-related symptoms. Each item is scored on a scale of 1 (no symptoms) to 4 (severe symptoms), and the scores for each symptom are summed to obtain a total score. So, the possible scores range from 15 to 60, with a higher score indicating greater severity.

Time frame: Baseline and 10 weeks (end of treatment)

Population: We report the data on all participants, regardless of how the initial dose of bacteria was administered.

ArmMeasureGroupValue (MEAN)Dispersion
Combined GroupChildhood Autism Rating Scale (CARS)Baseline39.7 units on a scaleStandard Deviation 5.5
Combined GroupChildhood Autism Rating Scale (CARS)10 weeks34.1 units on a scaleStandard Deviation 4.7
Comparison: Wilcoxon signed-rank test comparing the baseline score vs. the score at 10 weeks (end of treatment).p-value: <0.001Wilcoxon (Mann-Whitney)
Secondary

Daily Stool Record (DSR)

The DSR is a record of the type of stool that a participant had each day, using the Bristol Stool Form which ranges from 1 (very hard) to 7 (liquid). We then analyzed the data as % days of abnormal stools over a 14 day period, where an abnormal stool is defined as an unusually hard stool (types 1-2), unusually soft stool (types 6-7), or no stool that day. So, the possible range of % days of abnormal stools is from 0% to 100%, with a higher score indicating a more severe problem.

Time frame: Baseline and 10 weeks (end of treatment)

Population: We report the data on all participants, regardless of how the initial dose of bacteria was administered.

ArmMeasureGroupValue (MEAN)Dispersion
Combined GroupDaily Stool Record (DSR)Baseline62 percentage of days with abnormal stoolStandard Deviation 22
Combined GroupDaily Stool Record (DSR)10 weeks34 percentage of days with abnormal stoolStandard Deviation 24
Comparison: Wilcoxon signed rank test was used to compare scores at baseline vs. at 10 weeks (end of treatment)p-value: 0.002Wilcoxon (Mann-Whitney)
Secondary

Parent Global Impressions-Revised (PGI-R)

The PGI-R is a rating of change of 18 autism symptoms compared to baseline, with each symptom rated on a Likert scale from -3 (much worse) to zero (no change) to +3 (much better). We report the average change of the 18 symptoms, so the possible range is from -3 to +3.

Time frame: Baseline and 10 weeks (end of treatment)

Population: We report the data on all participants regardless of how the initial dose of bacteria was administered.

ArmMeasureValue (MEAN)Dispersion
Combined GroupParent Global Impressions-Revised (PGI-R)1.4 units on a scaleStandard Deviation 0.9
p-value: <0.001t-test, 2 sided
Secondary

Short Sensory Profile

The Short Sensory Profile is an assessment of sensory problems. However, the data on this scale was not collected due to administrative error.

Time frame: baseline and 10 weeks

Population: Due to a logistical error, this data was not collected

Secondary

Social Responsiveness Scale (SRS)

The SRS is an assessment of social skills based on 65 items, where each item is scored on a range of 0 (no symptoms) to 3 (severe symptoms). The total score is a sum of the individual scores, so the total possible range is from 0 to 195, with a higher score indicating greater severity of symptoms.

Time frame: Baseline and 10 weeks (end of treatment)

Population: We report the data on 18 participants, regardless of how the initial dose of bacteria was administered.

ArmMeasureGroupValue (MEAN)Dispersion
Combined GroupSocial Responsiveness Scale (SRS)Baseline116.2 units on a scaleStandard Deviation 24.9
Combined GroupSocial Responsiveness Scale (SRS)10 weeks97.8 units on a scaleStandard Deviation 27.9
Comparison: Wilcoxon signed-rank test comparing scores at baseline vs. 10 weeks (end of treatment)p-value: <0.001Wilcoxon (Mann-Whitney)
Secondary

Vineland Adaptive Behavior Scale (VABS)

The VABS is an assessment of adaptive behaviors, and we analyzed it to determine the developmental age of the participants, with possible scores ranging from 0 years to 21 years.

Time frame: baseline and 18 weeks (8 weeks after treatment stopped)

Population: We report the data on all participants, regardless of how they received the initial dose of bacteria.

ArmMeasureGroupValue (MEAN)Dispersion
Combined GroupVineland Adaptive Behavior Scale (VABS)18 weeks6.84 yearsStandard Deviation 2.81
Combined GroupVineland Adaptive Behavior Scale (VABS)Baseline5.39 yearsStandard Deviation 2.48
Comparison: 2-sided t-test comparing the group at baseline vs. 18 weeks (8 weeks after end of treatment)p-value: <0.001t-test, 2 sided

Source: ClinicalTrials.gov · Data processed: Feb 27, 2026