Colorectal Carcinoma, Enteropathogenic Escherichia Coli .
Conditions
Brief summary
Despite the characterization of many aetiologic genetic changes. The specific causative factors in the development of sporadic colorectal cancer remain unclear. This study was performed to detect the possible role of Enteropathogenic Escherichia coli (EPEC) in developing colorectal carcinoma.
Detailed description
Fresh biopsy specimens have been obtained from the colonic mucosa overlying the colorectal cancer as well as from the colon of the healthy controls. Culture, genotyping and virulence of EPEC were done using (nutrient broth culture, and PCR). Strains biochemically identified as E. coli were selected from the surface of a MacConkey's plate and were serogrouped by slide agglutination tests
Interventions
Sponsors
Study design
Eligibility
Inclusion criteria
* patients with colorectal carcinoma after have been diagnosed
Exclusion criteria
* Patients with inflammatory bowel disease (IBD) or macroscopic signs of inflammation were excluded.
Design outcomes
Primary
| Measure | Time frame | Description |
|---|---|---|
| virulence genes: eaeA, bfpA and stx. PCR | 1 week | E. coli colonies isolated from the mucosa of colorectal cancers and from healthy controls were harvested and subjected to DNA extraction (QIAGEN) |
Secondary
| Measure | Time frame | Description |
|---|---|---|
| EPEC serogrouping: | 1 week | Strains biochemically identified as E. coli were selected from the surface of a MacConkey's plate and were serogrouped by slide agglutination tests to detect EPEC using O-specific nonavalent E.coli antiserum (O26, O55, O86, O111, O114, O119, O124, O125, O126, O127, O128, O142), according to the manufacturer's instructions (Bio-Rad). |
| Strains: OF E COLI | 1 week | The specimens were immediately transferred to the lab, inoculated in nutrient broth and vortexed for a few seconds then incubated overnight. The following day the broth culture was subcultured on enteric isolation media. Identification of E. coli was carried out by using standard biochemical methods. |
Countries
Egypt