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NCGENES: North Carolina Clinical Genomic Evaluation by NextGen Exome Sequencing

NCGENES: North Carolina Clinical Genomic Evaluation by NextGen Exome Sequencing

Status
Completed
Phases
NA
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT01969370
Acronym
NCGENES
Enrollment
645
Registered
2013-10-25
Start date
2012-08-31
Completion date
2017-03-01
Last updated
2017-05-03

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Cancer, Cardiovascular Disease, Congenital Abnormalities, Hearing Loss, Neurologic Dysfunction

Keywords

Cancer, Cardiovascular disease, Neurodegenerative disease, Neurodevelopmental disease, Dysmorphology, Hearing loss, Other conditions, including ophthalmic conditions

Brief summary

This study is part of a larger consortium project investigating the validity and best use of next-generation sequencing (in particular, whole exome sequencing, or WES) in clinical care. This sub-project is investigating benefits and harms of providing WES diagnostic and different types of incidental findings to adult patients and parents of pediatric patients who undergo WES because they have symptoms suggesting genetic disease.

Detailed description

This study is part of a larger consortium project investigating the validity and best use of next-generation sequencing (in particular, whole exome sequencing, or WES) in clinical care. Participants are patients who were either seen in the University of North Carolina Cancer and Adult Genetics Clinic or referred to the study by their physician. They will be approached by their physician or a genetic counselor for recruitment. Once enrolled, a clinical geneticist or genetic counselor will obtain consent and collect blood samples to be analyzed using WES. Results may include information related to a diagnosis and incidental information. Medically actionable incidental findings will be CLIA (Clinical Laboratory Improvement Amendments)-certified and returned to participants in a routine genetic counseling session, along with diagnostic findings. Eligible adult participants will be randomized to have the opportunity to choose to get certain types of non-medically actionable incidental findings, as well. Their decisions will be investigated, as will psychosocial and behavioral responses to sequencing and receiving sequencing information. This is a longitudinal, mixed methods study (i.e., multiple assessments pre- and post-return of results, with both quantitative and qualitative methods used to gather data). Because only the quantitative component of the study uses randomization, only measures and procedures associated with that component are described here.

Interventions

BEHAVIORALExperimental

Option to request non-medically actionable incidental information (after receiving education about them)

Sponsors

National Human Genome Research Institute (NHGRI)
CollaboratorNIH
UNC Lineberger Comprehensive Cancer Center
CollaboratorOTHER
University of North Carolina, Chapel Hill
Lead SponsorOTHER

Study design

Allocation
RANDOMIZED
Intervention model
PARALLEL
Primary purpose
OTHER
Masking
SINGLE (Outcomes Assessor)

Eligibility

Sex/Gender
ALL
Healthy volunteers
No

Inclusion criteria

\- To receive whole exome sequencing in the study, adult or child patients must have a significant chance of having a genetic disorder, as determined by experts on the study team using criteria that depend on the genetic disorder in question. Representative criteria are listed below and will be considered together to determine whether patterns indicate a likely genetic etiology. Cancer * Age of diagnosis * Presence of bilateral (or multiple) cancers * Diagnosis of a rare type of cancer * Details of the family history Cardiovascular Conditions * Certain clinical findings, such as prolonged QT interval on electrocardiogram. * Presence of hypertrophic cardiomyopathy or aortic aneurysm * Age of diagnosis * Presence of family history Pediatric neurodevelopmental disorders * Specific brain structural brain abnormalities * Presence of certain seizure types * Dysmorphic features

Design outcomes

Primary

MeasureTime frameDescription
Extent of test-specific distress 2 weeks after return of results2 weeks after return of diagnostic results; for adult patient participants who are eligible and who request them, 2 weeks after return of non-medically actionable incidental resultsMeasured with an adapted version of the multidimensional impact of testing scale (MICRA)

Secondary

MeasureTime frameDescription
Extent of psychological distress 2 weeks after return of resultsAll participants: 2 wks after return of diagnostic (dx) resultsSymptoms of depression and anxiety measured with the Hospital Anxiety and Depression Scale
Change in test-specific distress at 3 and 6 months after return of resultsAdult patient participants: change from 2 weeks after return of diagnostic results to 3 months and 6 months after return of diagnostic resultsMeasure is an adapted version of the multidimensional impact of testing scale MICRA)
Extent of communication of test results with other people2 weeks after return of diagnostic resultsMotivations of communications will also be assessed and examined for descriptive analyses.
Extent of information seeking2 weeks after consent (T1) and change from T1 to 2 weeks after return of diagnostic resultsParticipants will answer questions about the extent to which they sought information about whole exome sequencing and results it produces. Questions also ask about sources of that information (e.g., the Internet, doctors) to provide descriptive data about how participants get information.
Extent of Decision Regret 2 weeks after consentAll participants: 2 wks after consent (T1)
Extent of Decision Regret 2 weeks after return of resultsAll participants: 2 wks after return of diagnostic (dx) results and, for eligible adults who request them, return of incidental resultsAlso administered 2 wks after return of non-medically actionable incidental results for eligible adult patient participants who request them.
Change in decision regretFor all participants: Change from post-consent to post-return of results; Additional for adults: change at 3 and 6 months after return of dx results
Extent of Healthcare Utilization 2 weeks after consentAll participants: 2 wks after consent (T1)
Extent of psychological distress 2 weeks after consentAll participants: 2 wks after consentSymptoms of depression and anxiety measured with the Hospital Anxiety and Depression Scale
Change in Healthcare UtilizationAll participants: Change in utilization from post-consent to post-return of results; Additional for adult patients: Change at 3 and 6 months after return of dx results
Enactment of health-related lifestyle behaviors 2 weeks after consentAdult participants: 2 wks after consent (T1)Behaviors include those related to diet, physical activity, smoking, drinking, and substance use.
Enactment of health-related lifestyle behaviors 2 weeks after return of resultsAdult participants: 2 wks after return of diagnostic (dx) resultsBehaviors include those related to diet, physical activity, smoking, drinking, and substance use.
Change in enactment of health-related lifestyle behaviorsAdult participants: Change in behaviors from 2 wks after consent (T1) to 2 wks, 3 months, and 6 months after return of dx resultsBehaviors include those related to diet, physical activity, smoking, drinking, and substance use.
Change in extent of psychological distressAll participants: Change from 2 wks after consent (T1) to 2 wks after return of diagnostic (dx) results; Additional for adult patients: Change at 3 and 6 months after return of dx resultsSymptoms of depression and anxiety measured with the Hospital Anxiety and Depression Scale
Extent of health-related Quality of Life 2 weeks after consentAll participants: 2 wks after consent (T1)Measured with the Medical Outcomes Study Short Form-12
Extent of health-related Quality of Life 2 weeks after return of resultsAll participants: 2 wks after return of diagnostic resultsMeasured with the Medical Outcomes Study Short Form-12
Change in extent of health-related Quality of LifeAll participants: Change from 2 wks after consent to 2 weeks after return of diagnostic resultsMeasured with the Medical Outcomes Study Short Form-12
Extent of Healthcare Utilization 2 weeks after return of resultsAll participants: 22 wks after return of diagnostic (dx) results

Countries

United States

Outcome results

None listed

Source: ClinicalTrials.gov · Data processed: Feb 4, 2026