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A Pilot Project Exploring the Impact of Whole Genome Sequencing in Healthcare

The MedSeq Project Pilot Study: Integrating Whole Genome Sequencing Into the Practice of Clinical Medicine

Status
Completed
Phases
NA
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT01736566
Enrollment
213
Registered
2012-11-29
Start date
2011-12-31
Completion date
2021-01-02
Last updated
2024-08-27

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Healthy Adults (Full Study and Extension Phase), Hypertrophic Cardiomyopathy or Dilated Cardiomyopathy

Keywords

Primary Care, Cardiology, Hypertrophic Cardiomyopathy, Dilated Cardiomyopathy, Whole Genome Sequencing

Brief summary

The MedSeq™ Project seeks to explore the impact of incorporating information from a patient's whole genome sequence into the practice of clinical medicine. In the extension phase of MedSeq we are attempting increase our participant diversity by increasing targeted enrollment of African/African American patient participants.

Detailed description

Whole genome sequencing (WGS) and whole exome sequencing (WES) services are currently available to and are being utilized by physicians and their patients in both research and clinical settings. The widespread availability and use of WGS and WES in the practice of clinical medicine is imminent. In the very near future, sequencing of individual genomes will be inexpensive and ubiquitous, and patients will be looking to the medical establishment for interpretations, insight and advice to improve their health. Developing standards and procedures for the use of WGS information in clinical medicine is an urgent need, but there are numerous obstacles related to integrity and storage of WGS data, interpretation and responsible clinical integration. MedSeq™ seeks to develop a process to integrate WGS into clinical medicine and explore the impact of doing so. We believe that WGS will be used in many ways, including two distinct and complementary situations. In generally healthy patients, physicians will use the results of WGS to derive insight into future health risks and inform prevention and surveillance efforts, a category we refer to as General Genomic Medicine. In patients presenting with a family history or symptoms of a disease, physicians will use the results of WGS to interrogate particular sets of genes known to be associated with the disease in question, a category we refer to as Disease-Specific Genomic Medicine. Beginning in fall 2012, we will enroll 10 primary care physicians and 100 of their healthy middle-aged patients to evaluate the use of General Genomic Medicine, and 10 cardiologists and 100 of their patients presenting with hypertrophic cardiomyopathy (HCM) or dilated cardiomyopathy (DCM) to evaluate the use of Disease-Specific Genomic Medicine. We will randomize physicians and their patients within each of the above models to receive clinically meaningful information derived from WGS versus current standard of care without the use of WGS. MedSeq™ is comprised of three distinct but highly collaborative projects. Project 1 will enroll physicians and patients into the protocol, educate the physicians on basic genomic principles and safely monitor the use of genomic information in clinical practice. Project 2 will use a WGS analysis/interpretation pipeline to generate a genome report on each patient randomized to receive WGS in this protocol. Project 3 will examine preferences and motivations of physicians and patients enrolled, evaluate the flow and utilization of genomic information within the clinical interactions, and assess understanding, behavior, medical consequences and healthcare costs associated with the use of WGS in these models of medical practice. In an extension phase of the study, we will 1) recruit approximately 10-15 patient-participants who self-identify as African or African American, whose physicians deem to be healthy. All will be placed in the whole genome-sequencing arm of the study. They will undergo the same activities as traditional MedSeq participants except for randomization. 2) We will conduct a targeted phenotype assessment on MedSeq Project patient-participants who are identified to have a monogenic finding. We plan to perform additional analysis by reviewing their medical records and looking specifically with their variant in mind to see if features associated with the variants were known prior to the study or were identified by further testing or by their physical during the course of the study. This initiative will significantly accelerate the use of genomics in clinical medicine by creating and safely testing novel methods for integrating information from WGS into physicians' care of patients.

Interventions

OTHERFamily History + Whole Genome Sequencing

Doctors and their patients receive a Genome Report and a Family History report. There are two sections of the Genome Report: 1. The General Genome Report, which include highly penetrant disease mutations, carrier status for recessive disease, and pharmacogenetic associations. 2. The Cardiac Risk Supplement, which contain genetic information found in the genome regarding cardiac diseases or a risk of cardiovascular diseases that can help with the care of the patient. Extension Phase: Experimental: Family History + Whole Genome Sequencing \*In the main study participants are randomized to either the Experimental or Other Arm, in the Extension phase of the study all participants are in the Experimental Arm.

OTHERFamily History Only

Doctors and their patients receive a Family History report.

Sponsors

National Human Genome Research Institute (NHGRI)
CollaboratorNIH
Baylor College of Medicine
CollaboratorOTHER
Duke University
CollaboratorOTHER
Brigham and Women's Hospital
Lead SponsorOTHER

Study design

Allocation
RANDOMIZED
Intervention model
PARALLEL
Primary purpose
HEALTH_SERVICES_RESEARCH
Masking
NONE

Eligibility

Sex/Gender
ALL
Age
18 Years to 90 Years
Healthy volunteers
Yes

Inclusion criteria

Note for Age Eligibility: * Cardiology patients 18 Years to 90 Years OR * Primary Care Patients 40 Years to 65 Years (Adult, Senior) Inclusion Criteria: Primary Care * Generally healthy (as defined by the primary care provider) adult patients at Brigham and Women's Hospital ages 40-65. All patients must be fluent in English. Cardiology * Patients in the Partners Healthcare System who are 18 years or older with a diagnosis of hypertrophic cardiomyopathy (HCM) or dilated cardiomyopathy (DCM) and a family history of HCM or DCM who previously had or who are candidates for targeted HCM or DCM genetic testing through routine clinical practice within Partners. All patients must be fluent in English.

Exclusion criteria

Primary Care * Patients who do not meet the above criteria. Patients with cardiac disease or a progressive debilitating illness. Patients who are pregnant or patients whose spouses/significant others are pregnant. Patients with untreated clinical anxiety or depression (as measured by a Hospital Anxiety and Depression Scale (HADS) score \> 11 administered at the baseline study visit.) Cardiology * Patients who do not meet the above criteria. Patients with a progressive debilitating illness. Patients who are pregnant or patients whose spouses/significant others are pregnant. Patients with untreated clinical anxiety or depression (as measured by a Hospital Anxiety and Depression Scale (HADS) score \> 11 administered at the baseline study visit.) Extension Phase - Additional Inclusion Criteria Part 1: * Above inclusion and

Design outcomes

Primary

MeasureTime frameDescription
Change in Perceived UtilityAt baseline and 6-months post-disclosure (approx. 17 mos. after baseline)A novel survey item asked participants to rate the usefulness of whole genome sequencing results for managing health on a 1-10 scale. Scores at 6 months were compared to scores at baseline.
Change in Health Behaviors6-weeks post-disclosure and 6-months post-disclosure (6 wks. follow-up administered approx. 12.5 mos. and 6 mos. follow-up approx. 17 mos. after baseline)Novel items that asked whether participants changed vitamin use, supplement use, medication use, diet, exercise, or other health behaviors. Counts and percentages represent participants who reported any health behavior changes.
Information SharingAt the disclosure visit (about 1 hour after results disclosure, avg. 11 mos. after baseline) and 6-months post-disclosure (approx. 17 mos. after baseline)Sharing of information was assessed by asking patients if they intended to share results with others (at the end of the disclosure visit) and if they had shared their results with others (6 months after disclosure) adapted from the Health Information National Trends Survey (HINTS).
Changes in Genomic LiteracyAssessing Genomic Literacy at baseline and 6-months post-disclosure (approx. 17 mos. after baseline)Changes in participants' genomic literacy were measured with an 11-item measure adapted from the ClinSeq Study (Kaphingst K.A. et al. 2012) administered at baseline and 6 months post-disclosure. Items are marked as correct (1) or incorrect (0) and summed for a total scale range of 0 to 11, with higher scores indicating higher genomic literacy.
Changes in Health Care Utilization6 months prior to disclosure and 6-months post-disclosure (approx. 17 mos. after baseline) and 5-years post-disclosureParticipants' health care utilization was assessed through a combination of medical record reviews and novel and adapted measures from the Behavioral Risk Factor Surveillance System (BRFSS). Changes are assessed by comparing the number of services and procedures received in 6 months following disclosure against the number of services and procedures received in the 6 months prior to disclosure.
Change in Attitudes and TrustChange at 6-weeks post-results disclosure relative to baseline, administered approx.12.5 months after baselineAdapted measures (Hall, MA, et al. 2006) assessed participants' attitudes toward genetic information, trust of their physicians and the medical system regarding interpretation and use of genetic information. Higher scores on a 12-60 scale represent more positive attitudes and greater trust.
Change in Self EfficacyBaseline and 6-months post-results disclosure (6 mos. follow-up administered approx. 17 months after baseline)Assessed through a scale developed for the Multiplex Initiative (Kaphingst, K.A., et al. 2012). Higher scores on a 0-24 scale indicate greater confidence in participants' abilities to understand genetic information.
Change in Preferences for WGS InformationBaseline and 6-weeks post-disclosure (6 wks follow-up administered approx. 12.5 mos. after baseline)Through nine novel survey items, participants were asked about their preferences for the types of genetic testing results they would like to receive from their whole genome sequence. Scores on an 0-9 scale represent the change in the number of categories of types of genetic testing results out of 9 that participants wanted to learn about from Baseline to 6-weeks follow-up.
Change in Perceived HealthBaseline, at the disclosure visit (about 1 hour after results disclosure, avg. 11 mos. after baseline) and 6-months post-disclosure (6 mos. follow-up follow-up administered approx. 17 months after baseline)A single-item measure assessed how participants perceived their own health on a 1-5 scale. Adapted from the SF-12 (DeSalvo KB, Qual Life Res, 2006). Higher scores indicate more positive perceptions of health at follow-up
Change in Shared Decision MakingBaseline and 6-weeks post-disclosure (6 wks follow-up administered approx. 12.5 mos. after baseline)Changes in shared decision making were assessed through a single item adapted from the Control Preferences Scale, a measure designed to ascertain the degree of control an individual wants to assume when decisions are being made about medical treatment. Higher scores on a scale of 1-3 indicate preferences towards more equally shared decision making (Heisler et al 2003). Higher mean changes over time indicate a change in preference towards more equally shared decision making at follow-up.
Change in Intolerance of UncertaintyBaseline and 6-months post-disclosure (6 mos. follow-up administered approx. 17 mos. after baseline)Changes in participants' tolerance for uncertainty were assessed through a short 12-item version of the Intolerance of Uncertainty Scale (Carleton, 2007). Total summed scale range is 12-60, with higher scores indicating increased negative feelings about uncertainty from baseline to follow-up.
Change in General Anxiety and DepressionBaseline, at the disclosure visit (about 1 hour after results disclosure, avg. 11 mos. after baseline), 6-weeks post-disclosure and 6-months post-disclosure (6 wks. follow-up administered approx. 12.5 mos and 6 mos follow-up approx 17 mos. after baseline)The Hospital Anxiety and Depression Scale (HADS) scale was administered through a survey. This is a validated scale designed to assess the participants' level of depression and anxiety through Likert-type questions. Total ranges for each summed subscale, anxiety and depression, is 0-21. Any participant scoring \>14 on the anxiety subscale or \>16 on the depression subscale were contacted by study staff for evaluation. Higher scores indicate increased anxiety or depression from baseline to follow-up.

Secondary

MeasureTime frameDescription
Decisional RegretAt post-disclosure visit (about 1 hour after results disclosure, avg. 11 mos. after baseline), at 6-weeks post-disclosure, and at 6-months post-disclosure (6 wks follow-up approx. 12.5 mos. and 6 mos. follow-up approx. 17 mos. after baseline)Participants' satisfaction with their decision to participate in the MedSeq Project through a 5-item validated scale (Brehaut 2003). Average score computed after reversing scores of 2 negatively phrased items and converting score to range from 0-100 by subtracting 1 and multiplying by 25. Higher scores indicate greater regret.
UnderstandingAt post-disclosure visit (about 1 hour after results disclosure, avg. 11 mos. after baseline), at 6-weeks post-disclosure, and at 6-months post-disclosure (6 wks follow-up approx. 12.5 mos. and 6 mos. follow-up approx. 17 mos. after baseline)A novel item assessed participants' subjective understanding of their study results on a 1-5 scale, where higher scores indicate greater subjective understanding.
ExpectationsBaselineNovel survey items asked participants about whether or not their genetic test results would be useful for specific reasons. Response options were no, probably not, probably yes, and yes. Responses of probably yes and yes were combined to simplify presentation of data.
Psychological Impact6-weeks post-disclosure and 6-months post-disclosure (6wks. follow-up administered approx. 12.5 mos. and 6 mos. follow-up approx. 17 mos. after baseline)Psychological impact was assessed by a modified version of the Multidimensional Impact of Cancer Risk Assessment (MICRA) questionnaire. Higher scores indicated more distress related to study results.

Countries

United States

Participant flow

Recruitment details

Participant recruitment began in 2012 at Brigham and Women's hospital by letter, email, phone and in person.

Participants by arm

ArmCount
Family History + Whole Genome Sequencing: Primary Care
Doctors and their patients receive a Genome Report and an Annotated Family History Report. Main Study Experimental: Family History + Whole Genome Sequencing (Genome Report): Doctors and their patients receive a Genome Report and a Family History Report. There are two sections of the Genome Report: 1. The General Genome Report, which includes highly penetrant disease mutations, carrier status for recessive disease, and pharmacogenetic associations. 2. The Cardiac Risk Supplement, which contains genetic information found in the genome regarding cardiac diseases or a risk of cardiovascular diseases that can help with the care of the patient. Extension Phase: Experimental: Family History + Whole Genome Sequencing (Genome Report) \*In the main study participants are randomized between Experimental and Comparator, in the Extension phase of the study all participants are in the Experimental Arm.
51
Family History Only: Primary Care
Doctors and their patients receive an Annotated Family History Report only. Active Comparator: Standard of Care Only: Doctors and their patients receive a Family History report only
50
Family History + Whole Genome Sequencing - Cardiology
Doctors and their patients receive a Genome Report and an Annotated Family History Report. Main Study Experimental: Family History + Whole Genome Sequencing (Genome Report): Doctors and their patients receive a Genome Report and a Family History Report. There are two sections of the Genome Report: 1. The General Genome Report, which includes highly penetrant disease mutations, carrier status for recessive disease, and pharmacogenetic associations. 2. The Cardiac Risk Supplement, which contains genetic information found in the genome regarding cardiac diseases or a risk of cardiovascular diseases that can help with the care of the patient. Extension Phase: Experimental: Family History + Whole Genome Sequencing (Genome Report) \*In the main study participants are randomized between Experimental and Comparator, in the Extension phase of the study all participants are in the Experimental Arm.
50
Family History Only: Cardiology
Doctors and their patients receive an Annotated Family History Report only. Active Comparator: Family History Only: Doctors and their patients receive a Family History report only
52
Extension Cohort
Doctors and their patients receive a Genome Report and an Annotated Family History Report. There are two sections of the Genome Report: 1. The General Genome Report, which includes highly penetrant disease mutations, carrier status for recessive disease, and pharmacogenetic associations. 2. The Cardiac Risk Supplement, which contains genetic information found in the genome regarding cardiac diseases or a risk of cardiovascular diseases that can help with the care of the patient. * In the main study, participants are randomized between Experimental and Comparator. For the Extension cohort, all participants receive whole genome sequencing.
10
Total213

Baseline characteristics

CharacteristicFamily History Only: Primary CareFamily History + Whole Genome Sequencing - CardiologyFamily History Only: CardiologyExtension CohortFamily History + Whole Genome Sequencing: Primary CareTotal
Age, Categorical
<=18 years
0 Participants0 Participants0 Participants0 Participants0 Participants0 Participants
Age, Categorical
>=65 years
3 Participants18 Participants16 Participants0 Participants2 Participants39 Participants
Age, Categorical
Between 18 and 65 years
47 Participants32 Participants36 Participants10 Participants49 Participants174 Participants
Age, Continuous54.6 years
STANDARD_DEVIATION 7.6
55.9 years
STANDARD_DEVIATION 16.1
55.9 years
STANDARD_DEVIATION 12.2
51.4 years
STANDARD_DEVIATION 8.3
55.2 years
STANDARD_DEVIATION 7
55.4 years
STANDARD_DEVIATION 11.3
Race (NIH/OMB)
American Indian or Alaska Native
0 Participants0 Participants0 Participants0 Participants0 Participants0 Participants
Race (NIH/OMB)
Asian
0 Participants1 Participants1 Participants0 Participants3 Participants5 Participants
Race (NIH/OMB)
Black or African American
2 Participants3 Participants0 Participants10 Participants1 Participants16 Participants
Race (NIH/OMB)
More than one race
2 Participants0 Participants1 Participants0 Participants0 Participants3 Participants
Race (NIH/OMB)
Native Hawaiian or Other Pacific Islander
0 Participants0 Participants0 Participants0 Participants0 Participants0 Participants
Race (NIH/OMB)
Unknown or Not Reported
3 Participants1 Participants3 Participants0 Participants1 Participants8 Participants
Race (NIH/OMB)
White
43 Participants45 Participants47 Participants0 Participants46 Participants181 Participants
Region of Enrollment
United States
50 participants50 participants52 participants10 participants51 participants213 participants
Sex: Female, Male
Female
30 Participants24 Participants19 Participants7 Participants29 Participants109 Participants
Sex: Female, Male
Male
20 Participants26 Participants33 Participants3 Participants22 Participants104 Participants

Adverse events

Event typeEG000
affected / at risk
EG001
affected / at risk
EG002
affected / at risk
EG003
affected / at risk
EG004
affected / at risk
deaths
Total, all-cause mortality
0 / 510 / 503 / 501 / 520 / 10
other
Total, other adverse events
0 / 513 / 500 / 500 / 520 / 10
serious
Total, serious adverse events
0 / 510 / 503 / 501 / 520 / 10

Outcome results

Primary

Change in Attitudes and Trust

Adapted measures (Hall, MA, et al. 2006) assessed participants' attitudes toward genetic information, trust of their physicians and the medical system regarding interpretation and use of genetic information. Higher scores on a 12-60 scale represent more positive attitudes and greater trust.

Time frame: Change at 6-weeks post-results disclosure relative to baseline, administered approx.12.5 months after baseline

Population: Participants who completed the baseline survey and 6 week follow-up survey

ArmMeasureValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareChange in Attitudes and Trust0.0 units on a scaleStandard Deviation 5.3
Family History Only: Primary CareChange in Attitudes and Trust0.7 units on a scaleStandard Deviation 4.5
Family History + Whole Genome Sequencing - CardiologyChange in Attitudes and Trust3.5 units on a scaleStandard Deviation 5.1
Family History Only: CardiologyChange in Attitudes and Trust1.8 units on a scaleStandard Deviation 3.5
Extension CohortChange in Attitudes and Trust1.0 units on a scaleStandard Deviation 6.3
Primary

Change in General Anxiety and Depression

The Hospital Anxiety and Depression Scale (HADS) scale was administered through a survey. This is a validated scale designed to assess the participants' level of depression and anxiety through Likert-type questions. Total ranges for each summed subscale, anxiety and depression, is 0-21. Any participant scoring \>14 on the anxiety subscale or \>16 on the depression subscale were contacted by study staff for evaluation. Higher scores indicate increased anxiety or depression from baseline to follow-up.

Time frame: Baseline, at the disclosure visit (about 1 hour after results disclosure, avg. 11 mos. after baseline), 6-weeks post-disclosure and 6-months post-disclosure (6 wks. follow-up administered approx. 12.5 mos and 6 mos follow-up approx 17 mos. after baseline)

Population: Participants who completed the baseline survey and follow-up surveys

ArmMeasureGroupValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareChange in General Anxiety and DepressionChange in Anxiety at disclosure0.1 units on a scaleStandard Deviation 2.3
Family History + Whole Genome Sequencing: Primary CareChange in General Anxiety and DepressionChange in Anxiety at 6 Weeks-1.4 units on a scaleStandard Deviation 3.2
Family History + Whole Genome Sequencing: Primary CareChange in General Anxiety and DepressionChange in Anxiety at 6 Months-.2 units on a scaleStandard Deviation 2.6
Family History + Whole Genome Sequencing: Primary CareChange in General Anxiety and DepressionChange in Depression at disclosure0 units on a scaleStandard Deviation 2.1
Family History + Whole Genome Sequencing: Primary CareChange in General Anxiety and DepressionChange in Depression at 6 Weeks-.3 units on a scaleStandard Deviation 2.1
Family History + Whole Genome Sequencing: Primary CareChange in General Anxiety and DepressionChange in Depression at 6 Months-.1 units on a scaleStandard Deviation 1.9
Family History Only: Primary CareChange in General Anxiety and DepressionChange in Depression at 6 Weeks0.4 units on a scaleStandard Deviation 2.7
Family History Only: Primary CareChange in General Anxiety and DepressionChange in Depression at 6 Months0.5 units on a scaleStandard Deviation 2.1
Family History Only: Primary CareChange in General Anxiety and DepressionChange in Anxiety at disclosure-.2 units on a scaleStandard Deviation 2.8
Family History Only: Primary CareChange in General Anxiety and DepressionChange in Anxiety at 6 Months-.1 units on a scaleStandard Deviation 2.6
Family History Only: Primary CareChange in General Anxiety and DepressionChange in Depression at disclosure0.7 units on a scaleStandard Deviation 2.6
Family History Only: Primary CareChange in General Anxiety and DepressionChange in Anxiety at 6 Weeks-.8 units on a scaleStandard Deviation 2.3
Family History + Whole Genome Sequencing - CardiologyChange in General Anxiety and DepressionChange in Depression at disclosure-0.1 units on a scaleStandard Deviation 1.6
Family History + Whole Genome Sequencing - CardiologyChange in General Anxiety and DepressionChange in Depression at 6 Weeks-.8 units on a scaleStandard Deviation 1.7
Family History + Whole Genome Sequencing - CardiologyChange in General Anxiety and DepressionChange in Anxiety at disclosure-.4 units on a scaleStandard Deviation 1.9
Family History + Whole Genome Sequencing - CardiologyChange in General Anxiety and DepressionChange in Anxiety at 6 Months-.2 units on a scaleStandard Deviation 2.4
Family History + Whole Genome Sequencing - CardiologyChange in General Anxiety and DepressionChange in Anxiety at 6 Weeks-1.7 units on a scaleStandard Deviation 2.6
Family History + Whole Genome Sequencing - CardiologyChange in General Anxiety and DepressionChange in Depression at 6 Months-.1 units on a scaleStandard Deviation 1.9
Family History Only: CardiologyChange in General Anxiety and DepressionChange in Depression at disclosure0 units on a scaleStandard Deviation 2
Family History Only: CardiologyChange in General Anxiety and DepressionChange in Anxiety at 6 Weeks-1.0 units on a scaleStandard Deviation 2.4
Family History Only: CardiologyChange in General Anxiety and DepressionChange in Anxiety at 6 Months-.4 units on a scaleStandard Deviation 2.4
Family History Only: CardiologyChange in General Anxiety and DepressionChange in Depression at 6 Months0 units on a scaleStandard Deviation 1.8
Family History Only: CardiologyChange in General Anxiety and DepressionChange in Depression at 6 Weeks-.2 units on a scaleStandard Deviation 1.8
Family History Only: CardiologyChange in General Anxiety and DepressionChange in Anxiety at disclosure-.3 units on a scaleStandard Deviation 2.8
Extension CohortChange in General Anxiety and DepressionChange in Depression at 6 Weeks-1.0 units on a scaleStandard Deviation 2.8
Extension CohortChange in General Anxiety and DepressionChange in Anxiety at 6 Months-0.9 units on a scaleStandard Deviation 3
Extension CohortChange in General Anxiety and DepressionChange in Anxiety at 6 Weeks-1.5 units on a scaleStandard Deviation 1.5
Extension CohortChange in General Anxiety and DepressionChange in Depression at 6 Months0.9 units on a scaleStandard Deviation 3.8
Extension CohortChange in General Anxiety and DepressionChange in Depression at disclosure-0.3 units on a scaleStandard Deviation 2.8
Extension CohortChange in General Anxiety and DepressionChange in Anxiety at disclosure-0.5 units on a scaleStandard Deviation 1.5
Primary

Change in Health Behaviors

Novel items that asked whether participants changed vitamin use, supplement use, medication use, diet, exercise, or other health behaviors. Counts and percentages represent participants who reported any health behavior changes.

Time frame: 6-weeks post-disclosure and 6-months post-disclosure (6 wks. follow-up administered approx. 12.5 mos. and 6 mos. follow-up approx. 17 mos. after baseline)

Population: Participants who attended disclosure sessions and responded to post-disclosure surveys

ArmMeasureGroupValue (COUNT_OF_PARTICIPANTS)
Family History + Whole Genome Sequencing: Primary CareChange in Health Behaviors6 Weeks Post-Disclosure24 Participants
Family History + Whole Genome Sequencing: Primary CareChange in Health Behaviors6 Months Post-Disclosure20 Participants
Family History Only: Primary CareChange in Health Behaviors6 Weeks Post-Disclosure16 Participants
Family History Only: Primary CareChange in Health Behaviors6 Months Post-Disclosure13 Participants
Family History + Whole Genome Sequencing - CardiologyChange in Health Behaviors6 Weeks Post-Disclosure17 Participants
Family History + Whole Genome Sequencing - CardiologyChange in Health Behaviors6 Months Post-Disclosure26 Participants
Family History Only: CardiologyChange in Health Behaviors6 Months Post-Disclosure20 Participants
Family History Only: CardiologyChange in Health Behaviors6 Weeks Post-Disclosure15 Participants
Extension CohortChange in Health Behaviors6 Weeks Post-Disclosure4 Participants
Extension CohortChange in Health Behaviors6 Months Post-Disclosure3 Participants
Primary

Change in Intolerance of Uncertainty

Changes in participants' tolerance for uncertainty were assessed through a short 12-item version of the Intolerance of Uncertainty Scale (Carleton, 2007). Total summed scale range is 12-60, with higher scores indicating increased negative feelings about uncertainty from baseline to follow-up.

Time frame: Baseline and 6-months post-disclosure (6 mos. follow-up administered approx. 17 mos. after baseline)

Population: Participants who completed both the baseline and 6-month follow-up surveys

ArmMeasureValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareChange in Intolerance of Uncertainty-0.5 units on a scaleStandard Deviation 6.3
Family History Only: Primary CareChange in Intolerance of Uncertainty0.3 units on a scaleStandard Deviation 6.6
Family History + Whole Genome Sequencing - CardiologyChange in Intolerance of Uncertainty-1.3 units on a scaleStandard Deviation 5.8
Family History Only: CardiologyChange in Intolerance of Uncertainty0 units on a scaleStandard Deviation 7.4
Extension CohortChange in Intolerance of Uncertainty4.9 units on a scaleStandard Deviation 14.4
Primary

Change in Perceived Health

A single-item measure assessed how participants perceived their own health on a 1-5 scale. Adapted from the SF-12 (DeSalvo KB, Qual Life Res, 2006). Higher scores indicate more positive perceptions of health at follow-up

Time frame: Baseline, at the disclosure visit (about 1 hour after results disclosure, avg. 11 mos. after baseline) and 6-months post-disclosure (6 mos. follow-up follow-up administered approx. 17 months after baseline)

Population: Participants who completed the item on patient surveys.

ArmMeasureGroupValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareChange in Perceived HealthChange at disclosure-0.1 units on a scaleStandard Deviation 0.6
Family History + Whole Genome Sequencing: Primary CareChange in Perceived HealthChange at 6 months post-disclosure-0.1 units on a scaleStandard Deviation 0.7
Family History Only: Primary CareChange in Perceived HealthChange at disclosure0 units on a scaleStandard Deviation 0.6
Family History Only: Primary CareChange in Perceived HealthChange at 6 months post-disclosure-0.1 units on a scaleStandard Deviation 0.7
Family History + Whole Genome Sequencing - CardiologyChange in Perceived HealthChange at disclosure0 units on a scaleStandard Deviation 0.6
Family History + Whole Genome Sequencing - CardiologyChange in Perceived HealthChange at 6 months post-disclosure-0.1 units on a scaleStandard Deviation 0.8
Family History Only: CardiologyChange in Perceived HealthChange at 6 months post-disclosure-0.3 units on a scaleStandard Deviation 0.8
Family History Only: CardiologyChange in Perceived HealthChange at disclosure-0.2 units on a scaleStandard Deviation 0.7
Extension CohortChange in Perceived HealthChange at disclosure0.3 units on a scaleStandard Deviation 0.5
Extension CohortChange in Perceived HealthChange at 6 months post-disclosure0.1 units on a scaleStandard Deviation 0.4
Primary

Change in Perceived Utility

A novel survey item asked participants to rate the usefulness of whole genome sequencing results for managing health on a 1-10 scale. Scores at 6 months were compared to scores at baseline.

Time frame: At baseline and 6-months post-disclosure (approx. 17 mos. after baseline)

Population: Participants who received whole genome sequencing and completed the survey items at baseline and at 6 months

ArmMeasureValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareChange in Perceived Utility-.6 units on a scaleStandard Deviation 2.5
Family History Only: Primary CareChange in Perceived Utility-.9 units on a scaleStandard Deviation 3
Family History + Whole Genome Sequencing - CardiologyChange in Perceived Utility-1.0 units on a scaleStandard Deviation 2.3
Primary

Change in Preferences for WGS Information

Through nine novel survey items, participants were asked about their preferences for the types of genetic testing results they would like to receive from their whole genome sequence. Scores on an 0-9 scale represent the change in the number of categories of types of genetic testing results out of 9 that participants wanted to learn about from Baseline to 6-weeks follow-up.

Time frame: Baseline and 6-weeks post-disclosure (6 wks follow-up administered approx. 12.5 mos. after baseline)

Population: Participants who completed both the baseline and 6-week follow-up surveys

ArmMeasureValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareChange in Preferences for WGS Information-.1 units on a scaleStandard Deviation 1.5
Family History Only: Primary CareChange in Preferences for WGS Information0.2 units on a scaleStandard Deviation 2.1
Family History + Whole Genome Sequencing - CardiologyChange in Preferences for WGS Information0 units on a scaleStandard Deviation 2
Family History Only: CardiologyChange in Preferences for WGS Information.4 units on a scaleStandard Deviation 2.3
Extension CohortChange in Preferences for WGS Information0.0 units on a scaleStandard Deviation 1.9
Primary

Change in Self Efficacy

Assessed through a scale developed for the Multiplex Initiative (Kaphingst, K.A., et al. 2012). Higher scores on a 0-24 scale indicate greater confidence in participants' abilities to understand genetic information.

Time frame: Baseline and 6-months post-results disclosure (6 mos. follow-up administered approx. 17 months after baseline)

Population: Participants randomized to the experimental Family History + Whole Genome Sequencing arm who completed both the baseline and the 6-month follow-up surveys

ArmMeasureValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareChange in Self Efficacy0.3 units on a scaleStandard Deviation 3.4
Family History Only: Primary CareChange in Self Efficacy0.5 units on a scaleStandard Deviation 4.3
Family History + Whole Genome Sequencing - CardiologyChange in Self Efficacy3.1 units on a scaleStandard Deviation 5.7
Primary

Change in Shared Decision Making

Changes in shared decision making were assessed through a single item adapted from the Control Preferences Scale, a measure designed to ascertain the degree of control an individual wants to assume when decisions are being made about medical treatment. Higher scores on a scale of 1-3 indicate preferences towards more equally shared decision making (Heisler et al 2003). Higher mean changes over time indicate a change in preference towards more equally shared decision making at follow-up.

Time frame: Baseline and 6-weeks post-disclosure (6 wks follow-up administered approx. 12.5 mos. after baseline)

Population: Participants who were completed the item on both the baseline and 6-week follow-up surveys

ArmMeasureValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareChange in Shared Decision Making0.1 units on a scaleStandard Deviation 0.7
Family History Only: Primary CareChange in Shared Decision Making0 units on a scaleStandard Deviation 0.5
Family History + Whole Genome Sequencing - CardiologyChange in Shared Decision Making0.2 units on a scaleStandard Deviation 0.8
Family History Only: CardiologyChange in Shared Decision Making0.1 units on a scaleStandard Deviation 0.7
Extension CohortChange in Shared Decision Making-0.2 units on a scaleStandard Deviation 0.8
Primary

Changes in Genomic Literacy

Changes in participants' genomic literacy were measured with an 11-item measure adapted from the ClinSeq Study (Kaphingst K.A. et al. 2012) administered at baseline and 6 months post-disclosure. Items are marked as correct (1) or incorrect (0) and summed for a total scale range of 0 to 11, with higher scores indicating higher genomic literacy.

Time frame: Assessing Genomic Literacy at baseline and 6-months post-disclosure (approx. 17 mos. after baseline)

Population: Participants who completed the genetic literacy items in the baseline and 6-month follow-up surveys

ArmMeasureValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareChanges in Genomic Literacy-.4 units on a scaleStandard Deviation 1.8
Family History Only: Primary CareChanges in Genomic Literacy-.5 units on a scaleStandard Deviation 2.3
Family History + Whole Genome Sequencing - CardiologyChanges in Genomic Literacy-.6 units on a scaleStandard Deviation 2.1
Family History Only: CardiologyChanges in Genomic Literacy-.2 units on a scaleStandard Deviation 1.2
Extension CohortChanges in Genomic Literacy0.0 units on a scaleStandard Deviation 1.6
Primary

Changes in Health Care Utilization

Participants' health care utilization was assessed through a combination of medical record reviews and novel and adapted measures from the Behavioral Risk Factor Surveillance System (BRFSS). Changes are assessed by comparing the number of services and procedures received in 6 months following disclosure against the number of services and procedures received in the 6 months prior to disclosure.

Time frame: 6 months prior to disclosure and 6-months post-disclosure (approx. 17 mos. after baseline) and 5-years post-disclosure

Population: All randomized participants who received disclosure

ArmMeasureGroupValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareChanges in Health Care UtilizationCardiology tests0.2 units on a scaleStandard Deviation 1
Family History + Whole Genome Sequencing: Primary CareChanges in Health Care UtilizationVisits3.9 units on a scaleStandard Deviation 7.9
Family History + Whole Genome Sequencing: Primary CareChanges in Health Care UtilizationHospitalizations0 units on a scaleStandard Deviation 0.1
Family History + Whole Genome Sequencing: Primary CareChanges in Health Care UtilizationLabs1.4 units on a scaleStandard Deviation 8.9
Family History + Whole Genome Sequencing: Primary CareChanges in Health Care UtilizationImaging tests0 units on a scaleStandard Deviation 2.1
Family History Only: Primary CareChanges in Health Care UtilizationCardiology tests0.2 units on a scaleStandard Deviation 0.8
Family History Only: Primary CareChanges in Health Care UtilizationImaging tests-.1 units on a scaleStandard Deviation 2.6
Family History Only: Primary CareChanges in Health Care UtilizationLabs-0.3 units on a scaleStandard Deviation 7.8
Family History Only: Primary CareChanges in Health Care UtilizationHospitalizations0 units on a scaleStandard Deviation 0.2
Family History Only: Primary CareChanges in Health Care UtilizationVisits2.3 units on a scaleStandard Deviation 6.8
Family History + Whole Genome Sequencing - CardiologyChanges in Health Care UtilizationImaging tests0.9 units on a scaleStandard Deviation 2.1
Family History + Whole Genome Sequencing - CardiologyChanges in Health Care UtilizationVisits1.7 units on a scaleStandard Deviation 7.8
Family History + Whole Genome Sequencing - CardiologyChanges in Health Care UtilizationLabs1.5 units on a scaleStandard Deviation 10.6
Family History + Whole Genome Sequencing - CardiologyChanges in Health Care UtilizationCardiology tests0.8 units on a scaleStandard Deviation 2.7
Family History + Whole Genome Sequencing - CardiologyChanges in Health Care UtilizationHospitalizations0.1 units on a scaleStandard Deviation 0.6
Family History Only: CardiologyChanges in Health Care UtilizationHospitalizations0.1 units on a scaleStandard Deviation 0.7
Family History Only: CardiologyChanges in Health Care UtilizationVisits1.7 units on a scaleStandard Deviation 7.1
Family History Only: CardiologyChanges in Health Care UtilizationCardiology tests0.9 units on a scaleStandard Deviation 3
Family History Only: CardiologyChanges in Health Care UtilizationImaging tests1.0 units on a scaleStandard Deviation 1.7
Family History Only: CardiologyChanges in Health Care UtilizationLabs1.5 units on a scaleStandard Deviation 7.4
Extension CohortChanges in Health Care UtilizationImaging tests0.0 units on a scaleStandard Deviation 0
Extension CohortChanges in Health Care UtilizationCardiology tests0.3 units on a scaleStandard Deviation 0.6
Extension CohortChanges in Health Care UtilizationVisits0.6 units on a scaleStandard Deviation 3.7
Extension CohortChanges in Health Care UtilizationHospitalizations0.0 units on a scaleStandard Deviation 0
Extension CohortChanges in Health Care UtilizationLabs0.5 units on a scaleStandard Deviation 1.2
Primary

Information Sharing

Sharing of information was assessed by asking patients if they intended to share results with others (at the end of the disclosure visit) and if they had shared their results with others (6 months after disclosure) adapted from the Health Information National Trends Survey (HINTS).

Time frame: At the disclosure visit (about 1 hour after results disclosure, avg. 11 mos. after baseline) and 6-months post-disclosure (approx. 17 mos. after baseline)

Population: Participants who answered information-sharing questions on the post-disclosure or 6-month follow-up questionnaire

ArmMeasureGroupValue (COUNT_OF_PARTICIPANTS)
Family History + Whole Genome Sequencing: Primary CareInformation SharingPlans to share at disclosure43 Participants
Family History + Whole Genome Sequencing: Primary CareInformation SharingShared, per 6 month survey41 Participants
Family History Only: Primary CareInformation SharingPlans to share at disclosure39 Participants
Family History Only: Primary CareInformation SharingShared, per 6 month survey27 Participants
Family History + Whole Genome Sequencing - CardiologyInformation SharingPlans to share at disclosure42 Participants
Family History + Whole Genome Sequencing - CardiologyInformation SharingShared, per 6 month survey38 Participants
Family History Only: CardiologyInformation SharingShared, per 6 month survey28 Participants
Family History Only: CardiologyInformation SharingPlans to share at disclosure30 Participants
Extension CohortInformation SharingPlans to share at disclosure6 Participants
Extension CohortInformation SharingShared, per 6 month survey4 Participants
Secondary

Decisional Regret

Participants' satisfaction with their decision to participate in the MedSeq Project through a 5-item validated scale (Brehaut 2003). Average score computed after reversing scores of 2 negatively phrased items and converting score to range from 0-100 by subtracting 1 and multiplying by 25. Higher scores indicate greater regret.

Time frame: At post-disclosure visit (about 1 hour after results disclosure, avg. 11 mos. after baseline), at 6-weeks post-disclosure, and at 6-months post-disclosure (6 wks follow-up approx. 12.5 mos. and 6 mos. follow-up approx. 17 mos. after baseline)

Population: Participants who answered the decisional regret items on the post-disclosure, 6 week follow-up, or 6 month follow-up surveys

ArmMeasureGroupValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareDecisional RegretPost-Disclosure8.9 units on a scaleStandard Deviation 16.7
Family History + Whole Genome Sequencing: Primary CareDecisional Regret6 Months Post-Disclosure11.5 units on a scaleStandard Deviation 18.2
Family History + Whole Genome Sequencing: Primary CareDecisional Regret6 Weeks Post-Disclosure9.8 units on a scaleStandard Deviation 16.6
Family History Only: Primary CareDecisional Regret6 Weeks Post-Disclosure17.2 units on a scaleStandard Deviation 15.5
Family History Only: Primary CareDecisional RegretPost-Disclosure12.9 units on a scaleStandard Deviation 14
Family History Only: Primary CareDecisional Regret6 Months Post-Disclosure19.9 units on a scaleStandard Deviation 19.3
Family History + Whole Genome Sequencing - CardiologyDecisional Regret6 Weeks Post-Disclosure5.8 units on a scaleStandard Deviation 9.7
Family History + Whole Genome Sequencing - CardiologyDecisional RegretPost-Disclosure6.2 units on a scaleStandard Deviation 9.6
Family History + Whole Genome Sequencing - CardiologyDecisional Regret6 Months Post-Disclosure7.9 units on a scaleStandard Deviation 11.2
Family History Only: CardiologyDecisional RegretPost-Disclosure15.8 units on a scaleStandard Deviation 22.8
Family History Only: CardiologyDecisional Regret6 Months Post-Disclosure11.3 units on a scaleStandard Deviation 15.9
Family History Only: CardiologyDecisional Regret6 Weeks Post-Disclosure15.0 units on a scaleStandard Deviation 20.6
Extension CohortDecisional Regret6 Weeks Post-Disclosure6.4 units on a scaleStandard Deviation 11.1
Extension CohortDecisional RegretPost-Disclosure6.1 units on a scaleStandard Deviation 10.8
Extension CohortDecisional Regret6 Months Post-Disclosure4.2 units on a scaleStandard Deviation 10.2
Secondary

Expectations

Novel survey items asked participants about whether or not their genetic test results would be useful for specific reasons. Response options were no, probably not, probably yes, and yes. Responses of probably yes and yes were combined to simplify presentation of data.

Time frame: Baseline

Population: Randomized participants who completed the baseline survey.

ArmMeasureGroupValue (COUNT_OF_PARTICIPANTS)
Family History + Whole Genome Sequencing: Primary CareExpectationsIdentify disease risk40 Participants
Family History + Whole Genome Sequencing: Primary CareExpectationsInfluence treatment43 Participants
Family History + Whole Genome Sequencing: Primary CareExpectationsInfluence medical care44 Participants
Family History + Whole Genome Sequencing: Primary CareExpectationsInfluence medications35 Participants
Family History + Whole Genome Sequencing: Primary CareExpectationsInfluence end-of-life planning27 Participants
Family History + Whole Genome Sequencing: Primary CareExpectationsInfluence reproductive decisions18 Participants
Family History Only: Primary CareExpectationsInfluence end-of-life planning19 Participants
Family History Only: Primary CareExpectationsInfluence reproductive decisions8 Participants
Family History Only: Primary CareExpectationsIdentify disease risk36 Participants
Family History Only: Primary CareExpectationsInfluence medical care46 Participants
Family History Only: Primary CareExpectationsInfluence medications41 Participants
Family History Only: Primary CareExpectationsInfluence treatment44 Participants
Family History + Whole Genome Sequencing - CardiologyExpectationsInfluence medications36 Participants
Family History + Whole Genome Sequencing - CardiologyExpectationsInfluence end-of-life planning25 Participants
Family History + Whole Genome Sequencing - CardiologyExpectationsIdentify disease risk41 Participants
Family History + Whole Genome Sequencing - CardiologyExpectationsInfluence medical care40 Participants
Family History + Whole Genome Sequencing - CardiologyExpectationsInfluence treatment41 Participants
Family History + Whole Genome Sequencing - CardiologyExpectationsInfluence reproductive decisions24 Participants
Family History Only: CardiologyExpectationsInfluence medications35 Participants
Family History Only: CardiologyExpectationsInfluence treatment44 Participants
Family History Only: CardiologyExpectationsInfluence medical care44 Participants
Family History Only: CardiologyExpectationsInfluence reproductive decisions16 Participants
Family History Only: CardiologyExpectationsInfluence end-of-life planning22 Participants
Family History Only: CardiologyExpectationsIdentify disease risk42 Participants
Extension CohortExpectationsInfluence end-of-life planning7 Participants
Extension CohortExpectationsInfluence medical care9 Participants
Extension CohortExpectationsInfluence treatment10 Participants
Extension CohortExpectationsInfluence reproductive decisions4 Participants
Extension CohortExpectationsInfluence medications10 Participants
Extension CohortExpectationsIdentify disease risk8 Participants
Secondary

Psychological Impact

Psychological impact was assessed by a modified version of the Multidimensional Impact of Cancer Risk Assessment (MICRA) questionnaire. Higher scores indicated more distress related to study results.

Time frame: 6-weeks post-disclosure and 6-months post-disclosure (6wks. follow-up administered approx. 12.5 mos. and 6 mos. follow-up approx. 17 mos. after baseline)

Population: Participants who answered the psychological impact items on the 6 week or 6 month follow-up questionnaires

ArmMeasureGroupValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CarePsychological Impact6 Weeks Post-Disclosure13.2 units on a scaleStandard Deviation 3.8
Family History + Whole Genome Sequencing: Primary CarePsychological Impact6 Months Post-Disclosure14.9 units on a scaleStandard Deviation 3.2
Family History Only: Primary CarePsychological Impact6 Weeks Post-Disclosure15.1 units on a scaleStandard Deviation 3.9
Family History Only: Primary CarePsychological Impact6 Months Post-Disclosure15.2 units on a scaleStandard Deviation 3.7
Family History + Whole Genome Sequencing - CardiologyPsychological Impact6 Weeks Post-Disclosure14.2 units on a scaleStandard Deviation 4.8
Family History + Whole Genome Sequencing - CardiologyPsychological Impact6 Months Post-Disclosure16.0 units on a scaleStandard Deviation 5.4
Family History Only: CardiologyPsychological Impact6 Months Post-Disclosure16.5 units on a scaleStandard Deviation 5.6
Family History Only: CardiologyPsychological Impact6 Weeks Post-Disclosure14.5 units on a scaleStandard Deviation 4.3
Extension CohortPsychological Impact6 Weeks Post-Disclosure11.4 units on a scaleStandard Deviation 4.2
Extension CohortPsychological Impact6 Months Post-Disclosure14.1 units on a scaleStandard Deviation 3.5
Secondary

Understanding

A novel item assessed participants' subjective understanding of their study results on a 1-5 scale, where higher scores indicate greater subjective understanding.

Time frame: At post-disclosure visit (about 1 hour after results disclosure, avg. 11 mos. after baseline), at 6-weeks post-disclosure, and at 6-months post-disclosure (6 wks follow-up approx. 12.5 mos. and 6 mos. follow-up approx. 17 mos. after baseline)

Population: Participants who answered the understanding item on the post-disclosure, 6-week follow-up, or 6-month follow-up surveys.

ArmMeasureGroupValue (MEAN)Dispersion
Family History + Whole Genome Sequencing: Primary CareUnderstandingPost-Disclosure4.2 units on a scaleStandard Deviation 0.7
Family History + Whole Genome Sequencing: Primary CareUnderstanding6 Months Post-Disclosure4.0 units on a scaleStandard Deviation 0.7
Family History + Whole Genome Sequencing: Primary CareUnderstanding6 Weeks Post-Disclosure4.2 units on a scaleStandard Deviation 0.8
Family History Only: Primary CareUnderstanding6 Weeks Post-Disclosure4.2 units on a scaleStandard Deviation 0.9
Family History Only: Primary CareUnderstandingPost-Disclosure4.5 units on a scaleStandard Deviation 0.7
Family History Only: Primary CareUnderstanding6 Months Post-Disclosure4.3 units on a scaleStandard Deviation 0.7
Family History + Whole Genome Sequencing - CardiologyUnderstanding6 Weeks Post-Disclosure4.1 units on a scaleStandard Deviation 0.7
Family History + Whole Genome Sequencing - CardiologyUnderstandingPost-Disclosure4.0 units on a scaleStandard Deviation 0.7
Family History + Whole Genome Sequencing - CardiologyUnderstanding6 Months Post-Disclosure4.0 units on a scaleStandard Deviation 0.8
Family History Only: CardiologyUnderstandingPost-Disclosure4.2 units on a scaleStandard Deviation 0.8
Family History Only: CardiologyUnderstanding6 Months Post-Disclosure4.2 units on a scaleStandard Deviation 0.7
Family History Only: CardiologyUnderstanding6 Weeks Post-Disclosure4.2 units on a scaleStandard Deviation 0.9
Extension CohortUnderstanding6 Weeks Post-Disclosure4.0 units on a scaleStandard Deviation 0.6
Extension CohortUnderstandingPost-Disclosure3.9 units on a scaleStandard Deviation 0.7
Extension CohortUnderstanding6 Months Post-Disclosure4.0 units on a scaleStandard Deviation 0.6

Source: ClinicalTrials.gov · Data processed: Mar 9, 2026