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Genetic Response to Warfarin in Healthy Subjects

Quantitative Pharmacogenomics of the Anticoagulant Response to Warfarin in Healthy Subjects

Status
Completed
Phases
NA
Study type
Interventional
Source
ClinicalTrials.gov
Registry ID
NCT01520402
Enrollment
35
Registered
2012-01-30
Start date
2009-06-30
Completion date
2011-05-31
Last updated
2013-02-12

For informational purposes only — not medical advice. Sourced from public registries and may not reflect the latest updates. Terms

Conditions

Healthy

Keywords

Genetic Determinants of Warfarin Dose Variability

Brief summary

The purpose of this study is to determine the importance of genetic differences on individuals' response to warfarin in a group of healthy subjects. Warfarin is also known by the trade name Coumadin and is in a class of medications called anticoagulants or blood thinners. Warfarin works by reducing the blood's ability to make clots. It is used to stop blood clots from forming or growing larger in your blood and blood vessels. Warfarin is prescribed for many conditions, including for people with certain types of irregular heartbeat, people with replacement or mechanical heart valves, people who have suffered a heart attack, people who have had orthopedic surgery, or who have a history of having blood clots. Warfarin is used to prevent or treat deep vein thrombosis (swelling and blood clot in a vein), pulmonary embolism (a blood clot in the lung), and strokes (a blood clot in the brain). Researchers have found that certain genes may affect how a person's body will break down or react to warfarin. If genetic information can help doctors better determine the best dose of warfarin before it is first given, this may help the doctors get patients to the correct levels of blood thinning and thereby reduce the risk of bleeding or the risk of developing a blood clot. The expectation of this study is that this information will ultimately improve warfarin therapy while lessening the risks associated with dosing errors. This study is considered investigational because the subjects are healthy and not being prescribed warfarin for clinical care.

Detailed description

Warfarin is a highly effective oral anticoagulant that is increasingly prescribed in the United States. It has a narrow therapeutic window, however, that represents an inherent limitation, such that insufficient and excessive levels of anticoagulation are associated with elevated risks of thrombosis and bleeding particularly frequent early in the initial dose-finding phase of therapy. Typically, anticoagulation is achieved through empiric dosing and titration with consideration of certain variables and frequent assessment of the international normalized ratio (INR). Despite these precautions, conventional dosing strategies are associated with therapeutic levels of anticoagulation only about half the time on treatment. Recently, genetic variants, specifically variations in the CYP2C9 and VKORC1 genes, have been identified that affect warfarin dose requirements, prompting the expectation that gene-based dosing strategies may maximize therapeutic efficacy while minimizing the risks associated with dosing errors. While the association between variation in these genes and differences in warfarin dose requirements has been identified, the specific contribution of allelic variation to the response to warfarin administration has not been thoroughly identified. The investigators therefore seek to assess the impact of allelic variation on warfarin dose-response relationships in a group of healthy subjects. The investigators hypothesize that genetic variation in the CYP2C9 and VKORC1 enzymes will result in differences in the warfarin dose-response relationships when accounting for non-genetic factors that can affect the pharmacokinetics of warfarin and its effect on coagulation.

Interventions

DRUGWarfarin

Enrolled subjects on a fixed vitamin K diet followed a standard warfarin dosing algorithm with daily point-of-care INR checks to goal INR ≥ 2 for two consecutive days, then to baseline INR≤1.2 off warfarin. Genotyping for common and rare polymorphisms in CYP2C9, VKORC1, and CYP4F2 performed at study entry and unblinded at completion. Plasma Vitamin K and S-warfarin levels are obtained at goal INR ≥ 2 and study exit (INR ≤1.2 off warfarin).

Sponsors

Icahn School of Medicine at Mount Sinai
Lead SponsorOTHER

Study design

Allocation
NA
Intervention model
SINGLE_GROUP
Primary purpose
BASIC_SCIENCE
Masking
NONE

Eligibility

Sex/Gender
ALL
Age
18 Years to 74 Years
Healthy volunteers
Yes

Inclusion criteria

* Healthy adult (\> 18 years old.) subjects not taking warfarin * Willing and able to grant written informed consent * Available in proximity to the Medical Center for the anticipated duration of data collection (approximately 3 weeks). * Pre-menopausal women required negative pregnancy test at study onset and willingness to abstain from sexual activity or use barrier contraception; oral contraceptives interfere with coumadin.

Exclusion criteria

* Daily prescribed medications including (1) a medication known to interact with warfarin, based on interactions listed in Micromedex as moderate or severe, and probable or definite (as of study start date, Appendix A) (2) aspirin or clopidogrel, which may increase bleeding risk in combination with warfarin. * Recent therapy (within two weeks) with a medication known to interact with warfarin based on medication interactions listed in Micromedex * History of thrombotic disorder requiring anticoagulant therapy * Thrombophilia or coagulopathy, by history or screening coagulation profile with INR or PTT level \> 2x the upper limit of normal * Family history of thrombophilia or coagulopathy; prisoners or wards of the state; scheduled elective surgery within one month * Active liver disease based on clinical history or serum transaminase levels \> 2x the upper limit of normal * Protein C or S Deficiency assessed on screening protein C and S activity profile * Age ≥ 75 * Pre-menopausal women on oral contraception * Non-English speaking individuals

Design outcomes

Primary

MeasureTime frameDescription
Median Cumulative Therapeutic Warfarin Dose (Milligrams)Requirements by Genotypeaverage of 2 - 13 daysTo assess the effect of genotype variants (CYP2C9 and VKORC1 -1639 G\>A) on the anticoagulant response to warfarin, the primary outcome was the cumulative dose required to achieve an INR value in the usual clinical therapeutic range (\>2.0) for two consecutive days.
Median Cumulative Warfarin Dose Requirement by Genotype Category (CYP2C9 and VKORC1 -1639 G>A Combination)2-30 daysSubjects were also grouped into four categories based on CYP2C9 and VKORC1 genotype profile: Group 1 (CYP2C9 wild-type and VKORC1 wild-type), Group 2 (CYP2C9 wild-type and VKORC1 variant), Group 3 (CYP2C9 variant and VKORC1 wild-type), and Group 4 (CYP2C9 variant and VKORC1 variant). Median cumulative warfarin dose requirement was determined for each genotype category.

Secondary

MeasureTime frameDescription
Median Cumulative Warfarin Dose Requirements by CYP4F2 Genotype Statusaverage of 2 - 30 daysTo assess the effect of CYP4F2 genotype variants on the anticoagulant response to warfarin.
Explained Variation in Combined Therapeutic Warfarin Dose Modelsaverage of 2 - 30 daysThe proportion of variance (R\^2) explained by each predictor was calculated using multivariate regression analysis and adjusted for age, gender and reported race, with outcome values logarithmically transformed. The study was powered to detect R\^2 \> 20%, and significance was accepted at p\<0.05.

Countries

United States

Participant flow

Recruitment details

Thirty-five subjects responded to email and printed solicitations advertised at Mount Sinai Medical Center for the study, and five were excluded due to medication conflicts, unwillingness to take warfarin, and medical conditions precluding participation. Dates of recruitment spanned 04/2009 - 05/2012.

Pre-assignment details

Subjects were educated regarding vitamin K restricted diet. Each maintained a food intake log and refrained from medications or alcohol for one week. Only subjects adhering to the prescribed diet and avoiding medications that could potentially interfere with warfarin metabolism qualified for the dose-response testing phase.

Participants by arm

ArmCount
Warfarin
Healthy subjects age 18-74 with no medical indication for warfarin therapy, who are free of medications and co-morbid medical conditions with the potential to interfere with warfarin metabolism, and who are willing to follow a fixed vitamin K diet (men 120 micrograms/day, women 90 micrograms/day) are included. Warfarin : Enrolled subjects on a fixed vitamin K diet followed a standard warfarin dosing algorithm with daily point-of-care INR checks to goal INR ≥ 2 for two consecutive days, then to baseline INR≤1.2 off warfarin. Genotyping for common and rare polymorphisms in CYP2C9, VKORC1, and CYP4F2 performed at study entry and unblinded at completion. Plasma Vitamin K and S-warfarin levels are obtained at goal INR ≥ 2 and study exit (INR ≤1.2 off warfarin).
30
Total30

Withdrawals & dropouts

PeriodReasonFG000
Overall StudyPhysician Decision3
Overall StudyWithdrawal by Subject2

Baseline characteristics

CharacteristicWarfarin
Age, Categorical
<=18 years
0 Participants
Age, Categorical
>=65 years
0 Participants
Age, Categorical
Between 18 and 65 years
30 Participants
Age Continuous32 years
STANDARD_DEVIATION 8
Region of Enrollment
United States
30 participants
Sex: Female, Male
Female
12 Participants
Sex: Female, Male
Male
18 Participants

Adverse events

Event typeEG000
affected / at risk
deaths
Total, all-cause mortality
— / —
other
Total, other adverse events
0 / 30
serious
Total, serious adverse events
0 / 30

Outcome results

Primary

Median Cumulative Therapeutic Warfarin Dose (Milligrams)Requirements by Genotype

To assess the effect of genotype variants (CYP2C9 and VKORC1 -1639 G\>A) on the anticoagulant response to warfarin, the primary outcome was the cumulative dose required to achieve an INR value in the usual clinical therapeutic range (\>2.0) for two consecutive days.

Time frame: average of 2 - 13 days

Population: Of the 35 subjects enrolled, 30 were included in the study as listed above.

ArmMeasureGroupValue (MEDIAN)
CYP2C9Median Cumulative Therapeutic Warfarin Dose (Milligrams)Requirements by GenotypeWild -Type52 milligrams
CYP2C9Median Cumulative Therapeutic Warfarin Dose (Milligrams)Requirements by GenotypeSingle Variant17 milligrams
CYP2C9Median Cumulative Therapeutic Warfarin Dose (Milligrams)Requirements by GenotypeDouble Variant27 milligrams
VKORC1 -1639 G>AMedian Cumulative Therapeutic Warfarin Dose (Milligrams)Requirements by GenotypeWild -Type52 milligrams
VKORC1 -1639 G>AMedian Cumulative Therapeutic Warfarin Dose (Milligrams)Requirements by GenotypeSingle Variant35 milligrams
VKORC1 -1639 G>AMedian Cumulative Therapeutic Warfarin Dose (Milligrams)Requirements by GenotypeDouble Variant15 milligrams
Primary

Median Cumulative Warfarin Dose Requirement by Genotype Category (CYP2C9 and VKORC1 -1639 G>A Combination)

Subjects were also grouped into four categories based on CYP2C9 and VKORC1 genotype profile: Group 1 (CYP2C9 wild-type and VKORC1 wild-type), Group 2 (CYP2C9 wild-type and VKORC1 variant), Group 3 (CYP2C9 variant and VKORC1 wild-type), and Group 4 (CYP2C9 variant and VKORC1 variant). Median cumulative warfarin dose requirement was determined for each genotype category.

Time frame: 2-30 days

Population: Of the 35 subjects enrolled, 30 were included in the study as above.

ArmMeasureGroupValue (MEDIAN)
CYP2C9Median Cumulative Warfarin Dose Requirement by Genotype Category (CYP2C9 and VKORC1 -1639 G>A Combination)Group 152 milligrams
CYP2C9Median Cumulative Warfarin Dose Requirement by Genotype Category (CYP2C9 and VKORC1 -1639 G>A Combination)Group 242 milligrams
CYP2C9Median Cumulative Warfarin Dose Requirement by Genotype Category (CYP2C9 and VKORC1 -1639 G>A Combination)Group 335 milligrams
CYP2C9Median Cumulative Warfarin Dose Requirement by Genotype Category (CYP2C9 and VKORC1 -1639 G>A Combination)Group 415 milligrams
Secondary

Explained Variation in Combined Therapeutic Warfarin Dose Models

The proportion of variance (R\^2) explained by each predictor was calculated using multivariate regression analysis and adjusted for age, gender and reported race, with outcome values logarithmically transformed. The study was powered to detect R\^2 \> 20%, and significance was accepted at p\<0.05.

Time frame: average of 2 - 30 days

Population: Of the 35 subjects enrolled, 30 completed the study as described above.

ArmMeasureValue (NUMBER)
CYP2C9Explained Variation in Combined Therapeutic Warfarin Dose Models0.03 proportion of variance
VKORC1 -1639 G>AExplained Variation in Combined Therapeutic Warfarin Dose Models0.57 proportion of variance
Demographic Plus CYP2C9 and VKORC1Explained Variation in Combined Therapeutic Warfarin Dose Models0.64 proportion of variance
Demographic Plus CYP2C9 and VKORC1 and CYP4F2Explained Variation in Combined Therapeutic Warfarin Dose Models0.65 proportion of variance
Secondary

Median Cumulative Warfarin Dose Requirements by CYP4F2 Genotype Status

To assess the effect of CYP4F2 genotype variants on the anticoagulant response to warfarin.

Time frame: average of 2 - 30 days

Population: Of 35 subjects were enrolled, 30 were included as listed above.

ArmMeasureGroupValue (MEDIAN)
CYP2C9Median Cumulative Warfarin Dose Requirements by CYP4F2 Genotype StatusSingle-Variant52 milligrams
CYP2C9Median Cumulative Warfarin Dose Requirements by CYP4F2 Genotype StatusDouble-Variant54 milligrams
CYP2C9Median Cumulative Warfarin Dose Requirements by CYP4F2 Genotype StatusWild-Type31 milligrams

Source: ClinicalTrials.gov · Data processed: Feb 4, 2026