Acute exacerbations of chronic lung disease productive of purulent sputum Respiratory
Conditions
Interventions
Sponsors
Eligibility
Inclusion criteria
Inclusion criteria: 1. Age: Subjects must be 18 years or older 2. Consent: Subjects must be able and willing to consent 3. Attending the Cambridge Centre for Lung Infection to commence a clinician-directed course of intravenous antibiotics abx for the treatment of clinically diagnosed acute pulmonary exacerbation of chronic lung disease 4. Able to produce a mucopurulent or purulent sputum sample at recruitment
Exclusion criteria
Exclusion criteria: Patients unable to produce purulent or mucopurulent sputum at recruitment
Design outcomes
Primary
| Measure | Time frame |
|---|---|
| The generation of a mechanistic model to explain the relationship between clinical data, conventional sputum microbiology and antibiotic sensitivity results, next-generation sequencing of sputum microbial nucleic acids (DNA and RNA) and clinical outcomes, including: 1. Improvement in symptom scores measured using questionnaires including Chronic Airways Assessment Test (CAAT) and Visual Analogue Scales (VAS) measured every seven days till completion of treatment and two weeks after treatment ends 2. Time till the next exacerbation measured using patient medical notes at one timepoint 3. Changes to antimicrobial resistance, predicted using whole sputum genomics and artificial intelligence | — |
Secondary
| Measure | Time frame |
|---|---|
| The generation of an AI algorithm that can predict the outcome of intravenous antibiotics treatment of sputum-producing acute exacerbation of chronic lung disease. Prediction accuracy will be measured against withheld test data using standard tools from the machine learning toolbox including ROC AUC for classification and the r2 metric for regression to continuous scores. | — |
Countries
England, United Kingdom